Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3938 |
Symbol | |
ID | 6181191 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 939199 |
End bp | 940275 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641683709 |
Product | ribonuclease III |
Protein accession | YP_001810620 |
Protein GI | 172062969 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.243257 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCACGC AAGCCAGGAA GCCGCTGATC TCGCTCGTCG TGCCGTTTCA TGACGAAGAG GAAACGATCG ACGCGTTCTT TGCCGAAACG CTGCCCATTC TGGAGTCGGT CGCCGCGGTC CGCTTCGAGA TCATCTGCAT CAACGACGGC AGCCGCGATC GCACGCTCGA CCGGCTGCTC GCGATCGCCG CCGGCGACGC GCGCGTGCAC GTCGTGGATC TCACGCGCCG CTTCGGCAAG GAAGCGGCGC TCACCGCGGG CCTCGACGAG GCGGCCGGCG CCGCGGTGAT CCTGATCGAC GCCGACCTGC AGGACCCGCC CGCGCTGATT CCCGCGATGA TCGAACGCTG GCGCGGCGGC GCCGAGGTCG TCGCCGCGAA ACGCACCGAC CGGATGTGCG ATCCCTACCT GCAGCGCGCG GCGGCGGCGC TGTACTATCG CGTGCACAAC GCGCTGTCCG AGGTGGAAAT GCCGGAGAAT GTCGGCGACT TCCGCCTGAT GGATCGCGAG GTCGTCGATG CGCTGCGCGC GCTGCCGGAG CGGCGACGGT TCATGAAGGG GCTGTTCGCA TGGGTCGGCT TTCGCACCGA GATCATCGAA TACACGCGTG CGCCGCGCAG CGGCGGCCGC TCGAAGTTCT CCGGGTGGCG GCGCTGGAAT TTCGCGCTCG AGGGCATCAC GAGCTTCAGC ACGGTGCCGC TGCGCGTGTG GACCTACGTC GGCATCACGT TCGCGATGCT CTCGCTCGTG TACGGCGCGT TCATCGTCGT ACGCACGCTG TTGTTCGGCA ATCCGGTGCA CGGCTACCCG TCGCTGATTT CGGTCGTGCT GTTCGTCGGC GGCATCCAGC TGATCGGCAT CGGCGTGATC GGCGAATACC TCGGCCGGAT CTATCACGAG TCGAAGCAGC GCCCCGTCTA TCTCGTCAGG CGGCGCTACC GGGCCGAGCG GGACGCCGCC GCGCAGCCCG CATCGAAGCT GCTGCAGTTC CCGCTCAAGC GTACGCATGC GGCCCGCCGC CGGACGACGA TACCGGCCGC CGCCGGCCTC GCCGCCCGCA AGGCGTCGTT CAAGTAA
|
Protein sequence | MSTQARKPLI SLVVPFHDEE ETIDAFFAET LPILESVAAV RFEIICINDG SRDRTLDRLL AIAAGDARVH VVDLTRRFGK EAALTAGLDE AAGAAVILID ADLQDPPALI PAMIERWRGG AEVVAAKRTD RMCDPYLQRA AAALYYRVHN ALSEVEMPEN VGDFRLMDRE VVDALRALPE RRRFMKGLFA WVGFRTEIIE YTRAPRSGGR SKFSGWRRWN FALEGITSFS TVPLRVWTYV GITFAMLSLV YGAFIVVRTL LFGNPVHGYP SLISVVLFVG GIQLIGIGVI GEYLGRIYHE SKQRPVYLVR RRYRAERDAA AQPASKLLQF PLKRTHAARR RTTIPAAAGL AARKASFK
|
| |