Gene BamMC406_3936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3936 
Symbol 
ID6181189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp936914 
End bp937954 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content69% 
IMG OID641683707 
Producthypothetical protein 
Protein accessionYP_001810618 
Protein GI172062967 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0442068 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0955478 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGACG CAGCCGACAC GCGATGCACC GGCCCCGCGT CCGAGCGAGG CTCCGTCGCG 
CTGTTCTTCC TGATGTTCCT GATTCCGCTG CTGTCGTTCG GTGCGCTGGC GATCGACATC
GCGTGGGTCG CCACCGTGCG CAACCAGCTT CAGAACGCCG CCGACGCGGC CGCGCTCGCG
GCGGCCGATG CGATGATGTC GCCGACTGGC GGCCCGCTGA ACTGGTCGCA GGCGGCGCCG
GCGGCGAACG GCGTGATCGC GCAGAATTCG GCGGCGGGCG CGGCGCTGGC GACGGGCACG
GTGACGACCG GCTATTGGAA CGTGGCGCGC AATCCGGCGA CGATGCAGCC GACCACCATC
ACGCCCGGCG CGTACGACGT GCCGGCGGTG CAGGTGACGG TGTCGCGCGC GCCGGGCATC
AACGGCGGCT CGATTCCCTT GCTGCTCGGC GGGCTGCTCG GCGTGCCCGG CACATCCGGC
AGCGCGACCG CGATCGCGGT GCTCGCCGCG CCCGGCGGGG TGGCGGCGGG TGGCCTCTTT
CCGATCGCGA TCGACCAGTG CGTGTACAAC CAGTACTGGA ATGCGGCGAC CAACCAGCCG
CTGATCAATC CGCTGACGGG CCAGCCGTAC GAGTTCTCGA TCACCAACGG CCAGACCTAT
GGCGCGCTGT GCATGGGGGG GCAGTGGACG TCGTTCCAGT CGACCGCGAC CGACACGACG
ACGATGGGCG GGCTAATGGT GACCGGCAAC CCGACGACGC TCAATATCGG CGACAGCATC
TACCTCGCGA CCGGCGTGAA GGCGACGCTC TACACGTCGG TGCCGGTCGG TGCGACGGTC
GTGCTGCCGG TCGTCACGCA GACCTCGAGC AGCACCTACG TGCCGATCGT CGCCTTCGCG
GCGTTCCATA TCGACGCGTC GTTTGGCGGC TCGAACAAGT ACATCCAGGG CCACTTCGTC
GCCGGCGTGA AGCTCACGGG CGTCGCGACC GGCGTCGGGC CGTACTACGG CGTGTACGTG
CCGCCGCGGC TCGCGTTGTG A
 
Protein sequence
MNDAADTRCT GPASERGSVA LFFLMFLIPL LSFGALAIDI AWVATVRNQL QNAADAAALA 
AADAMMSPTG GPLNWSQAAP AANGVIAQNS AAGAALATGT VTTGYWNVAR NPATMQPTTI
TPGAYDVPAV QVTVSRAPGI NGGSIPLLLG GLLGVPGTSG SATAIAVLAA PGGVAAGGLF
PIAIDQCVYN QYWNAATNQP LINPLTGQPY EFSITNGQTY GALCMGGQWT SFQSTATDTT
TMGGLMVTGN PTTLNIGDSI YLATGVKATL YTSVPVGATV VLPVVTQTSS STYVPIVAFA
AFHIDASFGG SNKYIQGHFV AGVKLTGVAT GVGPYYGVYV PPRLAL