| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3932 |
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| Symbol | |
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| ID | 6181113 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 933724 |
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| End bp | 934701 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641683703 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001810614 |
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| Protein GI | 172062963 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0420764 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.280623 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGCCCG CCGACCTGTT CGCGCTTGGC GCGTTCGTCG TGATCCTCGT GATCGGCCTC
ATGCTGTCCG CGCTGCTCGA TCGCGCGCGG CAGGCGCCGG AGCAGCGCAT TCGCGAGCGG
ATGCGGCGTC TCGCGCCGTC GCTGGCGGGC CGCGAGGCCG GTGCCCACGC CACGCCCGGC
GTCGCGCTGT TCAACCTGCC GCGCCGGCAG GGCCGCGTGC GTGCGTGGCT GCAGCGCTAC
GTGACGCGCG TGCGCGCGGT CGGCGGCGAG CGCGGGATGC GGATCGTCAT CGCCAGCGCG
ATCGTCGGCG AGATCGCGGC GATCGTCGCG ATGAAGCTCG TCGCGTTGCC GAGCGTCCTG
CATCCGCTGA TCTACGTCGG GTTGCCGCTG CTGGCGATGC GCGCCAGCTA TCGCGCGCTG
GTCGAGCGTT TCCGGCTGCG CTTTCTCGAA GCGTTCCCCG ACGCGATCGA CCTGATCGTG
CGTGCGGTGC GCGCGGGCAT CCCGGTCACG CAGGCGATCA GCACGGTCGG CGACAGCGCG
GCGGAGCCGG TGCGCTCGAC CTTCCGCACG ATGGGCGACA GCCTGCGCGT GGGCGTGGAT
CTGAAGGACG TGCTGACGCA GGCGTCGGAC CGGCTGATGA TCGCGGACTT CTCGTTCTTC
ACCGTCTACC TGCTGCTGCA GCGCGAGACC GGCGGCAGCC TCGGCGAAAC GCTCGACGAG
TTGTCGAGCA TCATCCGCAC GCGCCGCGAC ATCCGCCTGA AGACGCGCGC GTTGACCGCC
GAAGGGCGGA TCACGACGAA GATCATTTCG GCCGTGCCGT TCGTGATGAT CGGCGCGCTG
TTCCTCGTGA ACCGTTCATA CGTGATGTTG CTGTTCGACA CGCACGCGGG GCACGTGATG
CTGACGATCG CTGCCGTGCT GCTGACGATC GGACTGCTGA CGATCAACAA GATCTCGAAA
CTGGATACCG CGCGATGA
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| Protein sequence | MRPADLFALG AFVVILVIGL MLSALLDRAR QAPEQRIRER MRRLAPSLAG REAGAHATPG
VALFNLPRRQ GRVRAWLQRY VTRVRAVGGE RGMRIVIASA IVGEIAAIVA MKLVALPSVL
HPLIYVGLPL LAMRASYRAL VERFRLRFLE AFPDAIDLIV RAVRAGIPVT QAISTVGDSA
AEPVRSTFRT MGDSLRVGVD LKDVLTQASD RLMIADFSFF TVYLLLQRET GGSLGETLDE
LSSIIRTRRD IRLKTRALTA EGRITTKIIS AVPFVMIGAL FLVNRSYVML LFDTHAGHVM
LTIAAVLLTI GLLTINKISK LDTAR
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