| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3927 |
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| Symbol | |
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| ID | 6181128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 928204 |
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| End bp | 929232 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641683698 |
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| Product | Flp pilus assembly protein CpaB |
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| Protein accession | YP_001810609 |
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| Protein GI | 172062958 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3745] Flp pilus assembly protein CpaB |
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| TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.152772 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.4164 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAAAC CCCTGAGAAT GGCCGTGCTG ATCATCGCTG CCGGCATCGG TGCGTTCATC
CTGCGCCAAC TGTATGTTTC CGCGTCGACA CCTCCGCCGC CCGGTAACAC GGCCGACGTA
CGCGTGCGGG TCGCCGCGGC CGACCTTCCC GAAGGGCTGC TGCTTCGCGA CAACGATCTC
GCGTGGAAGT CCATGGCGCG CGCGCAGGTG CCGGCCGGCG CGTTCGTCGA ATCGCAACCG
GGCGCGGACC TGAAGGGGGC GCTGCTGCGC AACCGCGTCG ACGCGGGCGC GCCGATCCGC
GCGGACAACG TGATTTCGGC GGGCGCGCCG GATTTTCTCG CGGCCGCGCT GCAGCCCGGC
ATGCGCGCGA TCTCGGTGCC TGTCGACGAC GTGTCGGGCA ACGCGGGGCT GATCCAGCCG
GGCGACTTCG TCGACGTGGT GCTCACGCAG CAGATCGGTG GCTCCGCGAC GACGCCCGGC
ACGTTCGAAG CGGAGACGGT CGTGCGGCGC GCGCGCGTGC TCGCGGTCGG CTCGGAATTC
CAGCGCGCGA AGGGGCCCGC GAGCGCGCCG GACGCGCCGG TCCGCGCGCG CACGGTCACG
CTCGAGGTCG CGCCGCGCAC CGCGCAGGTC GTGCTGGTCG CGACGCGTCT CGGTTCGCTG
TCGCTCGCGC TGCGCAGCTT CGCGACGAGC GACCGCCGCC AGGCGGCGGG CGGCGACGAA
CAGGAGCCCG ATACGCCGCC GGTATGGGCC GGCGACGTAT CGCGCGCGGC CCGCGAAGCG
GCGCGTGCGC CGGCTGCGCG GACGGATGTC GGCACGCGCC CGTCGCAAAA CAACACGGTC
GTGATCTATC GCGGCTCGTC GGTCGACGAT GGATCGCGCG CCGGTGGCAC CGGCACGCCG
GGCGTGCCGC CGCTGCCGGC CGGTTGGCCG GGCACGCCTG TTGCACCGGT TGCGCCGGCC
GCACCCGCGG GCGGCAATGC GACGGCGGAC GCGGCGACGC AAGCGCCGCG GACCACGACG
GTGCAGTGA
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| Protein sequence | MPKPLRMAVL IIAAGIGAFI LRQLYVSAST PPPPGNTADV RVRVAAADLP EGLLLRDNDL
AWKSMARAQV PAGAFVESQP GADLKGALLR NRVDAGAPIR ADNVISAGAP DFLAAALQPG
MRAISVPVDD VSGNAGLIQP GDFVDVVLTQ QIGGSATTPG TFEAETVVRR ARVLAVGSEF
QRAKGPASAP DAPVRARTVT LEVAPRTAQV VLVATRLGSL SLALRSFATS DRRQAAGGDE
QEPDTPPVWA GDVSRAAREA ARAPAARTDV GTRPSQNNTV VIYRGSSVDD GSRAGGTGTP
GVPPLPAGWP GTPVAPVAPA APAGGNATAD AATQAPRTTT VQ
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