Gene BamMC406_3922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3922 
Symbol 
ID6180553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp923188 
End bp923595 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content67% 
IMG OID641683693 
Producthypothetical protein 
Protein accessionYP_001810604 
Protein GI172062953 
COG category[S] Function unknown 
COG ID[COG2343] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.00699821 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.612517 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGATCA GCCCCGATAC GCCCTCTCGT CCCGTGAAGT CGCCGGGCCC CGATCATCCG 
ATCACGATCG AGCCGCATCC GTCGCGCGTC GTGGTCAAGG TGGCCGGCAA GACCGTCGCC
GACACGCGCC GCGCGCTGGC GCTGCGCGAG GCCAGCTATC CGGCCGTGCT CTACATTCCG
CGCGAGGATG CCGACATGTC GCTGCTGCAA CGAACCGACC ATGCGACGTA CTGCCCGTAC
AAGGGCGATT GCGCGTACTA CTCGATCCCC GCCGGCGGCG AACGCGCGAC CAACGCGGTG
TGGACGTACG AGCATCCGAA TCCCGCCGTC GAATCGATTC GCGCGCACCT CGCGTTCTAT
CCGGACCGCG TCGACGCGAT CGAGGAAAGC CCGCTCGGCA CCGATTGA
 
Protein sequence
MSISPDTPSR PVKSPGPDHP ITIEPHPSRV VVKVAGKTVA DTRRALALRE ASYPAVLYIP 
REDADMSLLQ RTDHATYCPY KGDCAYYSIP AGGERATNAV WTYEHPNPAV ESIRAHLAFY
PDRVDAIEES PLGTD