Gene BamMC406_3920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3920 
Symbol 
ID6180186 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp921373 
End bp921957 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content71% 
IMG OID641683691 
Producthypothetical protein 
Protein accessionYP_001810602 
Protein GI172062951 
COG category[S] Function unknown 
COG ID[COG3554] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0130172 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.782299 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAAC GGGACGAAGC GGCGCGCACA CGATGCGTCG CGTGGCAGAT CGCGCAGACC 
TGGCAGGCGG GCGAATGGTG CCGGCTCGTC GAGACGCGTG ACGGCGTCGA TCTGTCGGGA
GCGGTCGCGG GTGCGATCGA CGGCACGCCG TTTCGCGTCG ACTATGCGAT CGCGTGCGGC
GCCGACTGGC TGACGCGTTC CGCGCGCGTC ACGCACTGGC TCGGCGCGGC GCCGCCAGCG
CAGCTCGAGA TCGAATGCGA CGCGGGGCGC TGGACGGTCG ACGGCGCCGA CGCGCCGGCA
CTCGCGGGCG CGACCGACTT CGATCTCGGC TTCAGTCCCT CGACCAATAC GCTGCCGATC
CGGCGTCTGA GGCTGGCGGT CGGCGCATCG GCCGTCATCC ATACCGCGTG GCTGCGCTTC
CCGGCGTTCG AGCTCGTGCG CGGCGAGCAG CGCTATGCGC GCACGGCGCA ACGCGCGTAC
CGCTACGAGA GCGGCACGTA TGCGGCCGAC ATCGCGGTGG ACGATGCGGG CCTCGTCACC
GATTACGACG AATGGCGGCG GATCGGTGCG ACGCGTTCGC CGTAA
 
Protein sequence
MTQRDEAART RCVAWQIAQT WQAGEWCRLV ETRDGVDLSG AVAGAIDGTP FRVDYAIACG 
ADWLTRSARV THWLGAAPPA QLEIECDAGR WTVDGADAPA LAGATDFDLG FSPSTNTLPI
RRLRLAVGAS AVIHTAWLRF PAFELVRGEQ RYARTAQRAY RYESGTYAAD IAVDDAGLVT
DYDEWRRIGA TRSP