| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3905 |
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| Symbol | |
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| ID | 6180605 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 908375 |
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| End bp | 909223 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641683677 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001810588 |
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| Protein GI | 172062937 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.635531 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCAG CATCCCGTAC CTGGTTTATC ACTGGCGCAT CGAAAGGCGT CGGTCAGAAG
CTCGTCCATC ATCTGCTCGA GCAAGGCCAC CGCGTGGCCG CGACGTCACG CACCGCAGCT
TCGCTGACGG AAGCGTTCGG TCAGGCATCC GACGACTTCC TTCCGCTCGA AGTGGACCTT
ACCAGCGAAC AGAGCATCCG ACAGGCAATC GAGAAGTCCG TGCAGACATT TGGCGCCATC
GATGTGGTCG TGAATAACGC CGGATACGCA CAGCAAGGAA CGGTCGAGGC ACTGTCCGAA
GGCGAGCTTC GTCAGAATTT CGAAGTGAAC TTCTTTGCCC CAGTGGCTGT ACTGCGCCAT
GCGTTGCCGC ATCTGCGCAG GCAGCGCAGC GGACACATCA TCAACATCTC GTCGATTGTT
GGCTACCAGG GCGGATATGC CGGCTGGGGC AGCTACGTTT CGAGCAAGTT CGCGCTGGCG
GGTTTGACGG AGTCGCTGGC CGCCGAAGTT GCTGAACTCG GCATTCGCGC CACGGTGGTG
TATCCGGGCC CAGTGCGCAC CGAATTCCTG TCGAGCGGCG CGCTGGCAGT GGCAAAGCGG
CAGATCGACG ACTATGCGGA GGCAAAGGCG TCGCTCGACC TGCACCTGGA CACGCTGCAC
GGCCATCAGG CGGGGGACCC AGACAAGCTG GCACTGCTGA TCATCCAGGC AGCCAGTGTC
GAGACGCCGC CCCTGCATCT GTTCGCCGGC AAGATCGCCA ACGAACTCGC AGCAGTCAAG
GCTAACGCTG TCGCACAGGA TCTCGACGCG TGGAGGGGCT CTTCCGAAGC CACCGACTTC
GCGGACTGA
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| Protein sequence | MKSASRTWFI TGASKGVGQK LVHHLLEQGH RVAATSRTAA SLTEAFGQAS DDFLPLEVDL
TSEQSIRQAI EKSVQTFGAI DVVVNNAGYA QQGTVEALSE GELRQNFEVN FFAPVAVLRH
ALPHLRRQRS GHIINISSIV GYQGGYAGWG SYVSSKFALA GLTESLAAEV AELGIRATVV
YPGPVRTEFL SSGALAVAKR QIDDYAEAKA SLDLHLDTLH GHQAGDPDKL ALLIIQAASV
ETPPLHLFAG KIANELAAVK ANAVAQDLDA WRGSSEATDF AD
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