| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3883 |
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| Symbol | |
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| ID | 6179433 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 880029 |
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| End bp | 881468 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641683654 |
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| Product | selenocysteine synthase |
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| Protein accession | YP_001810566 |
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| Protein GI | 172062915 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1921] Selenocysteine synthase [seryl-tRNASer selenium transferase] |
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| TIGRFAM ID | [TIGR00474] seryl-tRNA(sec) selenium transferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGAAC CGGGTTTGAA TGAACTGAAT GCCGTCCTCG CGCGCGTACC GTCGGTCGAG
CGCGTGCTGT CGTCGGCGCC GCTGCAGCCG CTGCTCGCCG ACTATGGCCG CACGCGCGTG
CTGAACGCGG TGCGCGCCGA ACTCGAACGC TGGCGTACCG CCGCGCAGCA GGATCCGGCG
GCGGCCGAGC CGCTCGACGA GCCGCGCATT GCGGCTGCCG TCGGCCGCAC GCTGGCCGCG
CGGAGCGCGG GCGCCGTGCG CGCGGTGTAC AACCTGACGG GCACCGTGCT GCATACCAAT
CTCGGGCGCG CGCTGTTGCC CGACGACGCG GTGCGCGCGG TGGTCGACGC GCTCACCCAG
CCCGTGAACC TCGAATTCGA TCTCGCCACC GGCCGCCGCG GCGACCGCGA CGATCTGATC
GACGATCTGC TGTGCGAACT GACCGGCGCG CAAGCCGCGA CCGTCGTCAA CAACAATGCC
GCGGCCGTGC TGCTGACGCT GTCGGCGCTG GCAGCGAAGA AGGAAGTCGT CGTGTCGCGC
GGCGAACTGG TCGAGATCGG CGGCGCATTC CGCATCCCCG ACATCATGAG CCGTGCGGGT
GCGAAGCTGC ATGAAGTCGG CACGACCAAC CGCACCCATC TGCGCGATTA TGCGGAGGCC
ATCGGCCCGC GCACGGCGAT GCTGATGAAG GTGCACTGCA GCAATTACGC GATCAGCGGC
TTCACGAAGG AAGTGACGCT GGCCGAACTC GCGCCGCTTG CGCGGGAGCA TGGGCTGCCG
GTGGCGGTCG ATCTCGGCAG CGGCACGCTC GCTGATCTGT CGCAATGGGG CCTGCCGCAC
GAGACGACCG TGCAGGAAAC CATCGCGGCC GGCGCGGACC TCGTCACGTT CAGCGGCGAC
AAGCTGCTCG GCGGGCCGCA GGCCGGCCTG ATCGTCGGCG ATCGCGCGCT CGTCGCGAAG
ATCAAGAAAC ACCCGCTCAA GCGTGCGCTG CGCGTCGGCA AGCTGACGCT CGCCGCGCTC
GAACCCGTGC TGCGGCTCTA CCAGGCGCCG GAATTCCTGT GCGAGCGGCT CACGACGCTG
CGGCTGCTGA CGCGGCCGCA ACGTGACATC ACCGAGGCCG CCGAGCGCGT GCGTCCGGCG
TTGCAGGCCG CGCTCGGCAG CGGCTTCGAC GTGCGCGTCG AGCCGATGTT CAGCCAGATC
GGCAGCGGTG CGCTGCCGCT CGACCAGTTG CCGAGCGCCG GGCTCGTCGT GCGCACGCCG
GACGGCAAGC GCGGCGGCCG TGCGCTCGCG CAGCTCGAGA AGCGTTTGCG CGAATGGCCG
CGTCCGGTGA TCGGCCGCGT GGCCGACAAT GCGCTGCGGC TCGATCTGCG TTGCCTCGAA
GCGGCCGACG AAGCGACATT CGTCGCGCAA TGCGTGCGGC TTGCAGGGCC CGCTGAATGA
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| Protein sequence | MSEPGLNELN AVLARVPSVE RVLSSAPLQP LLADYGRTRV LNAVRAELER WRTAAQQDPA
AAEPLDEPRI AAAVGRTLAA RSAGAVRAVY NLTGTVLHTN LGRALLPDDA VRAVVDALTQ
PVNLEFDLAT GRRGDRDDLI DDLLCELTGA QAATVVNNNA AAVLLTLSAL AAKKEVVVSR
GELVEIGGAF RIPDIMSRAG AKLHEVGTTN RTHLRDYAEA IGPRTAMLMK VHCSNYAISG
FTKEVTLAEL APLAREHGLP VAVDLGSGTL ADLSQWGLPH ETTVQETIAA GADLVTFSGD
KLLGGPQAGL IVGDRALVAK IKKHPLKRAL RVGKLTLAAL EPVLRLYQAP EFLCERLTTL
RLLTRPQRDI TEAAERVRPA LQAALGSGFD VRVEPMFSQI GSGALPLDQL PSAGLVVRTP
DGKRGGRALA QLEKRLREWP RPVIGRVADN ALRLDLRCLE AADEATFVAQ CVRLAGPAE
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