| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3879 |
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| Symbol | |
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| ID | 6181020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 874937 |
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| End bp | 877369 |
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| Gene Length | 2433 bp |
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| Protein Length | 810 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641683650 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_001810562 |
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| Protein GI | 172062911 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01553] formate dehydrogenase, alpha subunit, proteobacterial-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.319379 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAACC ATTGGGTCGA CATCAAGAAC GCGGACGTGA TTCTCGTGAT GGGCGGCAAT
GCAGCCGAGG CCCATCCGTG CGGTTTCAAG TGGGTAACGG AGGCGAAGGC GCACCGCAAG
GCGCGGCTGA TCGTCGTCGA CCCGCGCTTT ACGCGTACGG CGTCGGTGGC CGACTACTAC
GCGCCGATTC GCACCGGCAC CGACATCGTC TTCCTGGGCG GCGTCATCAA CTATCTGCTG
ACGAACGACA AGATCCAGCA TGAGTACGTG AAGAACTACA CGGACTTCTC GTTCATCGTG
CGCGAGGATT TCGCGTTCAA CGACGGCATC TATTCCGGCT ACGACGCCGA GAAGCACGCG
TATCCCGACA AATCGAGCTG GGACTACGAG CGCGGCGACG ACGGCTTCGT GAAGGTCGAC
CCGACGCTGC AGCATCCGCG GTGCGTGTAC AACCTGATGA AGCAGCATTA CGCACGCTAT
ACGCCGGACA TGGTCCAGCA GACGTGCGGC ACGCCGAAGG AGAAATTCCT GAAGGTGTGC
GAGATGCTCG CGACGACGGC CGTTCCCGGC CGCGCCGGCA CGGTGCTGTA CGCGCTCGGC
TGGACCCACC ATTCGATCGG CTCGCAGATG ATCCGCACCG GCGCGATGGT GCAGCTGCTG
CTCGGCAACA TCGGCATCGC CGGCGGCGGG ATGAACGCGC TGCGCGGCCA CTCGAACATC
CAGGGCTTGA CCGACCTCGG GCTGATGTCG AACCTGCTGC CGGGCTACAT GACGCTGCCG
ATGCAGGCCG AACAGGATTT CGACGGCTAC CTCAAGAAGC GCACGCAGCA GCCGCTGCGG
CCCAACCAGC TGAGCTACTG GAAGAACTAC AAGGCCTTCC ACGTCAGCTT CATGAAGTCG
TGGTGGGGCG ATGCGGCGAC CGCCGAGAAC AACTGGGGCT ACGACTACCT GCCGAAGCTC
GACAAGCAGT ACGACCTGCT GCAGGCGATC GAGCTGATGA ATGAAGGCAA GATGAACGGC
TACATCTGCC AGGGCTTCAA CCCGCTCGCG GCGGCGCCGT CGAAGGTGAA GACGGCCGCC
GGGCTCGCGA AGCTGAAGTG GCTCGTCATC ATGGATCCGC TCGCGACCGA GACGTCCGAG
TTCTGGAAGC ATCACGGCGA CTACAACGAC GTCGACTCGT CGAAGATCCA GACCGAGGTG
TTTCGTCTGC CGACCACGTG CTTCGCGGAG GAAGACGGCT CGCTCGTGAG TTCGAGCCGC
GTGCTGCAAT GGCACTGGAA GGGCGCGGAG CCGCCTGGCG AGGCGAGGAG CGATCTCGAG
ATCATGTCGG GGCTGTTCCT GCGCATGCGC AAGATGTACC AGAAGGACGG CGGCAAGTAT
CCGGACCCGA TCGTCAACCT GACCTGGCCG TATGCGAACC CGGAAAGCCC GACGCCTGCG
GAGCTCGCGA TGGAGTTCAA CGGGCGCGCG CTCGCCGATC TCCCCGATCC GAAGGATCCG
ACGAAGACGC TCGTGAAGAA GGGCGAGCAG CTCGCCGCGT TCGCGCAACT GAAGGACGAC
GGCACGACCG CGAGCGGCTG CTGGATCTTC TGCGGCGCAT GGACGCAGGC CGGCAACCAG
ATGGGTCGGC GCGACAACTC CGACCCGACC GGCATCGGCC AGACGCTGAA CTGGGCGTGG
GCATGGCCCG CGAACCGGCG GATCCTGTAC AACCGCGCAT CGTGCGACGT GAGCGGCAAG
CCGTTCGATC CGACCCGCAC GCTGATCGGC TGGAACGGCA ACGCATGGAA GGGCCCCGAC
GTGCCGGACT TCAAGGCGGA TGAACCACCT GAAAACGGGA TGGGGCCGTT CATCATGAAC
CCGGAAGGCG TCGCGCGCTT CTTCGCCCGC GCGGGGATGA ACGAAGGTCC GTTCCCCGAG
CACTACGAGC CGTTCGAGAC GCCGCTCGCC GCGAACCCGC TGCACCCGAA CAACCCGCAG
GCGCTGAACA ATCCGGCCGC CCGCGTGTTC CCGGGCGACC GCGCGTCGTT CGGGAAGGTG
TCGGAGTTCC CGCACGTCGC GACGACGTAC CGGCTGACCG AGCATTTCCA CTACTGGACC
AAGCATGCGC GGCTGAACTC GATCATCCAG CCCGAGCAAT TCGTCGAGAT CGGCGAGGAC
CTCGCGAAGG AAGTCGGCGT CGCGCACGGC GATCGCGTGA AGGTGTCGTC CAAGCGCGGC
TACATCGTCG CGGTCGCGCT CGTCACGAAG CGGATCAAGC CGCTGACGAT CGAGGGCAAG
AAGGTCCAGA CGGTCGGCGT CCCGTTGCAC TGGGGCTTCA AGGGTCTGAC GAAGCCCGGC
TATCTCGCCA ATACCCTGAC TCCGTCCGTA GGCGACGGCA ACTCGTACAC ACCGGAATTC
AAGTCGTTCC TGGTGAAGGT CGAAAAGGCG TAA
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| Protein sequence | MTNHWVDIKN ADVILVMGGN AAEAHPCGFK WVTEAKAHRK ARLIVVDPRF TRTASVADYY
APIRTGTDIV FLGGVINYLL TNDKIQHEYV KNYTDFSFIV REDFAFNDGI YSGYDAEKHA
YPDKSSWDYE RGDDGFVKVD PTLQHPRCVY NLMKQHYARY TPDMVQQTCG TPKEKFLKVC
EMLATTAVPG RAGTVLYALG WTHHSIGSQM IRTGAMVQLL LGNIGIAGGG MNALRGHSNI
QGLTDLGLMS NLLPGYMTLP MQAEQDFDGY LKKRTQQPLR PNQLSYWKNY KAFHVSFMKS
WWGDAATAEN NWGYDYLPKL DKQYDLLQAI ELMNEGKMNG YICQGFNPLA AAPSKVKTAA
GLAKLKWLVI MDPLATETSE FWKHHGDYND VDSSKIQTEV FRLPTTCFAE EDGSLVSSSR
VLQWHWKGAE PPGEARSDLE IMSGLFLRMR KMYQKDGGKY PDPIVNLTWP YANPESPTPA
ELAMEFNGRA LADLPDPKDP TKTLVKKGEQ LAAFAQLKDD GTTASGCWIF CGAWTQAGNQ
MGRRDNSDPT GIGQTLNWAW AWPANRRILY NRASCDVSGK PFDPTRTLIG WNGNAWKGPD
VPDFKADEPP ENGMGPFIMN PEGVARFFAR AGMNEGPFPE HYEPFETPLA ANPLHPNNPQ
ALNNPAARVF PGDRASFGKV SEFPHVATTY RLTEHFHYWT KHARLNSIIQ PEQFVEIGED
LAKEVGVAHG DRVKVSSKRG YIVAVALVTK RIKPLTIEGK KVQTVGVPLH WGFKGLTKPG
YLANTLTPSV GDGNSYTPEF KSFLVKVEKA
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