Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3863 |
Symbol | |
ID | 6180429 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 855267 |
End bp | 856313 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641683634 |
Product | GDP-mannose 4,6-dehydratase |
Protein accession | YP_001810546 |
Protein GI | 172062895 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1089] GDP-D-mannose dehydratase |
TIGRFAM ID | [TIGR01472] GDP-mannose 4,6-dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.879039 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAAA ACCGCAAGAA GGCCATCATC ACGGGGATCA CGGGGCAGGA CGGCGCCTAT CTGACCAAGC TGCTGCTCGA CAAGGGCTAC GAGGTCACGG GCACCTACCG CCGCACCAGC TCGGTGAACT TCTGGCGCAT CGCCGAACTC GGCGTCGACA CGCACCCGAA CCTGTCGCTC GTCGAGCACG ACCTGACCGA TGCCGGCTCC AGCCTGCGGC TGCTCGAACG CACGCAACCC GACGAGCTGT ACAACCTGGC CGCGCAGAGC TTCGTCGGCG TGTCGTTCGA CCAGCCGGCG ACGACCGCCG AAGTCACGGG CATCGGCCCG CTGAACCTGC TCGAGGCGAT TCGCGTGGTG AGCCCCAAGA CGCGCTTCTA CCAGGCGTCG ACGTCCGAGA TGTTCGGCAA GGTGCAGGCG ATCCCGCAGA CGGAAACGAC CGCGTTCTAC CCGCGCAGCC CGTACGGCGT CGCGAAGCTG TACGCGCACT GGATGACCGT GAACTACCGC GAGTCCTATG ATCTGTTCGG CTGCAGCGGC ATCCTGTTCA ACCACGAATC GCCGCTGCGC GGCCGCGAGT TCGTCACGCG CAAGATCACC GACACCGTCG CGAAGATCCG GCTCGGCAAG GCGACCAAGC TCGAGCTCGG CAACCTCGAC GCGAAGCGCG ACTGGGGCTT CGCGCTCGAG TACGTCGAAG GAATGTGGCG GATGCTGCAG GTCGACGAGC CCGACACCTA CGTGCTCGCG ACCAACCGCA CCGAGACCGT GCGCGACTTC GTGCGGATGG CGTTCGCGGC CGCTGGTTAC CAGCTCGAAT GGACCGGCAA GGGCGAGCAG GAGCGCGGCA TCGACGCGTC GAACGGCAAC GTGCTCGTCG AAGTGAACCC GAAGTTCTAC CGCCCCGCCG AAGTCGACCT GCTGATCGGC TGCGCGGACA AAGCAAAAAG CAAGCTGGGC TGGGCGCCGG AGACGACGCT CGAGCAGCTC TGCCAGATGA TGGTCGAAGC CGATCTGACG CGGAATCGTC ACCATGACAC GTACTGA
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Protein sequence | MSQNRKKAII TGITGQDGAY LTKLLLDKGY EVTGTYRRTS SVNFWRIAEL GVDTHPNLSL VEHDLTDAGS SLRLLERTQP DELYNLAAQS FVGVSFDQPA TTAEVTGIGP LNLLEAIRVV SPKTRFYQAS TSEMFGKVQA IPQTETTAFY PRSPYGVAKL YAHWMTVNYR ESYDLFGCSG ILFNHESPLR GREFVTRKIT DTVAKIRLGK ATKLELGNLD AKRDWGFALE YVEGMWRMLQ VDEPDTYVLA TNRTETVRDF VRMAFAAAGY QLEWTGKGEQ ERGIDASNGN VLVEVNPKFY RPAEVDLLIG CADKAKSKLG WAPETTLEQL CQMMVEADLT RNRHHDTY
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