| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3862 |
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| Symbol | |
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| ID | 6180428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 854312 |
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| End bp | 855280 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641683633 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001810545 |
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| Protein GI | 172062894 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.780042 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACGTA CTGAAGCCGG ACGCCCGTCG CGCCGCGCGT TCGTCACGGG CCTCACAGGC
TTCACCGGCC GCTACATGGC CCAGCGCCTC GAAGCCGCCG GCTACGACGT GTGGGGCAGC
GTGGCGCCCG GCGCGGCGCG GCCGGACGAT CCGGCGTTCG CGAACTGCAC GCTGCTGCCG
GTCGACCTGC TCGACGCGAA CGCGATACGC GCGGCGGCGG CCGATGCGCG GCCCGATGCG
GTCGTGCATC TCGCCGCGCG CGCGCATGTC GCGCAGGACG AGCCGTCGCA AACCTACGCG
GTCAACATCG TCGGCACGCG CAACCTGCTG GCCGCGCTCG CGGGCCTCGA CCACCGTCCG
TCGGCGGTCC TGCTCGCCAG TAGCGCGAAC ATCTACGGCA ATTCGACGGC CGGCGTGCTC
GACGAAGCGG TTCCGCCCGC GCCCGCGAAC GACTACGCGG TCAGCAAGCT CGCGATGGAA
TACGCGGCGA AGCTGTGGGC CGACCAGCTG CCGATCGTGA TCGCGCGGCC GTTCAACTAT
ACCGGCGTCG GCCAGGACGA TGCCTATCTG CTGCCGAAGC TCGTGTCGCA CTATGCGCGC
AATGCGCCGC GCATCTCGCT CGGCAATCTC GACGTGAGCC GCGATTTCTC CGACGTGCGC
GACGTGACGG CCGCCTACCT GAAGCTGCTC GAGGCGGCCC CGGCCGGCGA GACGTTCAAC
GTCTGCTCGG AACGCGCGTA TTCGCTGAAG GAAGTGCTGG CGATGCTGTC GCGGATCGCC
GGCTACGTGA TCGACGTGAC GATCGATCCG CGTTTCGTGC GGCAGAACGA AGTCAAGCGC
CTGAGCGGAT CGCGCGACAA GCTGCGGCGC GCGGTGGGCG AACTGCCCGT GACGCCGCTC
GACGACACGC TGCGCTGGAT GATGGAAGCG ATGCGCGACG TGCAGCAGCA GCCCGCGCAG
GCCGGCTGA
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| Protein sequence | MTRTEAGRPS RRAFVTGLTG FTGRYMAQRL EAAGYDVWGS VAPGAARPDD PAFANCTLLP
VDLLDANAIR AAAADARPDA VVHLAARAHV AQDEPSQTYA VNIVGTRNLL AALAGLDHRP
SAVLLASSAN IYGNSTAGVL DEAVPPAPAN DYAVSKLAME YAAKLWADQL PIVIARPFNY
TGVGQDDAYL LPKLVSHYAR NAPRISLGNL DVSRDFSDVR DVTAAYLKLL EAAPAGETFN
VCSERAYSLK EVLAMLSRIA GYVIDVTIDP RFVRQNEVKR LSGSRDKLRR AVGELPVTPL
DDTLRWMMEA MRDVQQQPAQ AG
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