| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3855 |
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| Symbol | trpA |
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| ID | 6180290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 846638 |
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| End bp | 847453 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641683626 |
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| Product | tryptophan synthase subunit alpha |
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| Protein accession | YP_001810538 |
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| Protein GI | 172062887 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0159] Tryptophan synthase alpha chain |
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| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCGTA TCCAGCAGAC CTTCGCCGCA CTCGCCGAAC AAGGCCGCAA GGGCCTGATC
CCGTTCATCA CGGCCGGCGA CCCCGATCCC GCAAAGACGG TCGAGTTCAT GCACGCGCTC
GCCGAAGGCG GCGCCGACGT GATCGAGCTC GGCGTGCCGT TTTCGGACCC GATGGCCGAC
GGCCCGGTGA TCCAGCGCTC GTCGGAGCGC GCGCTCGCGC GCGGCGTCAC ACTCAAGAGC
GTGCTCGCCG ACGTGAAGCG CTTCCGCGAC ACCAACCAGA CGACTCCCGT CGTGCTGATG
GGCTATGCGA ACCCGATCGA GCGGATGGGC GTCGACGCGT TCGCGACCGA AGCGCAGGCA
GCGGGCGTCG ACGGCGTGCT CGTGGTCGAC TATCCGCCCG AGGAAGCCGG CGTGTTCGCC
GAGAAAATGC GTGCCGCGCA GATCGATCCG ATCTTCCTGC TCGCCCCGAC GTCGACCGAC
GAGCGCATCG CCGACGTGGG CAAGATCGCG AGCGGCTACG TGTACTACGT GTCGCTCAAG
GGCGTGACCG GCGCCGGAAA TCTGGATGTT TCGAGCATTG CGGGTAAAAT CCCGGCCATC
AAGTCGCGCG TGCCGGTTCC GGTGGGCGTC GGCTTCGGCA TCCGCGACGC CGAAACGGCG
CGCGCGGTGG CCGAAGTGTC GGACGCCGTC GTGATCGGCA GCCGCCTGGT GCAACTGCTC
GAGAGCGCCG CGCCGGAAGG CGCCGCCGCC GCGCTGAAGA CATTCATCGC CGAGCTGCGC
GCCGCCCTGG ACGGCGCCGG CAAGACGGCG CGATAA
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| Protein sequence | MNRIQQTFAA LAEQGRKGLI PFITAGDPDP AKTVEFMHAL AEGGADVIEL GVPFSDPMAD
GPVIQRSSER ALARGVTLKS VLADVKRFRD TNQTTPVVLM GYANPIERMG VDAFATEAQA
AGVDGVLVVD YPPEEAGVFA EKMRAAQIDP IFLLAPTSTD ERIADVGKIA SGYVYYVSLK
GVTGAGNLDV SSIAGKIPAI KSRVPVPVGV GFGIRDAETA RAVAEVSDAV VIGSRLVQLL
ESAAPEGAAA ALKTFIAELR AALDGAGKTA R
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