| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3851 |
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| Symbol | truA |
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| ID | 6181459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 842930 |
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| End bp | 843742 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641683622 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_001810534 |
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| Protein GI | 172062883 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.845811 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGATCG CGCTTGGGAT TCAGTACGAC GGCGCGGCGT TCTGCGGCTG GCAGGCGCAG
CCGCACGGCA AGACCGTGCA GGACGCGCTC GAGCGCGCGC TCGGCGAATT CGCGTGCGTG
CCGTTGCACA CGACGGTCGC GGGGCGGACC GATACGGGCG TGCACGGGCT CGGGCAGGTC
GTGCACTTCG ACACGGACCT CGACCGCACG GATTTCTCGT GGGTGCGCGG CACCAACGCG
TTCCTGCCGT CCACCGTTTC CGTGCAGTGG GCGAAGCCGA TGCCGGACAC GTTCCATGCG
CGTTTCGCGG CGTTCGAACG CACCTATTAC TACGTGCTGT ACGTGCATCC CGTGCGCTCG
CCGATGCTGG CCGGCCGTGC GGGATGGATC CACACGCCGC TCGACGACGA CGCGATGCGC
GCCGCCGCCG CGCACCTGAT CGGCGAGCAT GACTTCTCGT CGTTCCGGTC GTCGGAATGC
CAGTCGAAGA CGCCGGTCAA ACACCTGTAT CAGATCGACG TGCGGCGCTC GGGCCACTTC
ATTCATTTCC GGTTCCGCGC GAACGCGTTC CTGCACCACA TGGTGCGCAA CCTGATGGGC
TGCCTCGTCG CGGTCGGGCG CGGCCGCTAT CCGGCGGACT GGCTCGCCGA CGTGCTGGCC
GGGCGCGACC GCACGCTCGC CGCGCCCACG TTCATGGCCG ACGGGCTGTA TCTCGCCCAT
GTCGGCTACC CGGCGGAATT CGCCGTCCCG CCCGCGCAAC TCGGCAGCGT GCCGTGGAGC
AGCGTCTGGG CCGATCTGGA CCTACCATCA TGA
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| Protein sequence | MRIALGIQYD GAAFCGWQAQ PHGKTVQDAL ERALGEFACV PLHTTVAGRT DTGVHGLGQV
VHFDTDLDRT DFSWVRGTNA FLPSTVSVQW AKPMPDTFHA RFAAFERTYY YVLYVHPVRS
PMLAGRAGWI HTPLDDDAMR AAAAHLIGEH DFSSFRSSEC QSKTPVKHLY QIDVRRSGHF
IHFRFRANAF LHHMVRNLMG CLVAVGRGRY PADWLADVLA GRDRTLAAPT FMADGLYLAH
VGYPAEFAVP PAQLGSVPWS SVWADLDLPS
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