Gene BamMC406_3846 details

Gene Information

• Locus tag: BamMC406_3846
• Symbol: leuD
• ID: 6179391
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia ambifaria MC40-6
• Kingdom: Bacteria
• Replicon accession: NC_010552
• Strand: +
• Start bp: 837370
• End bp: 838020
• Gene Length: 651 bp
• Protein Length: 216 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 641683617
• Product: isopropylmalate isomerase small subunit
• Protein accession: YP_001810529
• Protein GI: 172062878
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0066] 3-isopropylmalate dehydratase small subunit
• TIGRFAM ID: [TIGR00171] 3-isopropylmalate dehydratase, small subunit

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 28
• Fosmid unclonability p-value: 0.817461
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGAAAAAT TCACAGTGCA TACCGGCGTC GTGGCGCCGC TCGATCGCGA GAACGTCGAC 
ACCGACGCGA TCATCCCGAA GCAGTTCCTG AAGTCGATCA AGCGTACGGG CTTCGGTCCG 
AACGCGTTCG ACGAATGGCG TTATCTCGAC CACGGCGAGC CGGGCCAGGA CAACTCGAAG 
CGCCCGCTGA ACCCGGACTT CGTGCTGAAC CAGCCGCGCT ACCAGGGCGC ATCGGTGCTG 
CTCGCACGCA AGAACTTCGG CTGCGGCAGC TCGCGCGAGC ACGCACCGTG GGCGCTGCAG 
CAGTACGGCT TCCGCGCGAT CATCGCGCCG AGCTTCGCCG ACATCTTCTT CAACAACTGC 
TACAAGAACG GGCTGCTGCC GATCGTGCTG ACCGAGCAGC AGGTCGATCA CCTGTTCAAC 
GACACGTATG CGTTCAACGG CTATCAGCTG ACGGTCGACC TCGACGCGCA GGTCGTGCGC 
ACGGGCGACG GCCGCGAGTA TCCGTTCGAG ATCGCCGCGT TCCGCAAGTA CTGCCTGCTG 
AACGGCTTCG ACGACATCGG CCTCACGCTG CGTCACGCGG ACAAGATCCG CCAGTTCGAA 
GCCGAGCGGC TCGCGAAGCA GCCGTGGCTC AACAACAAGC TGGTCGGCTG A 

 

Protein sequence

MEKFTVHTGV VAPLDRENVD TDAIIPKQFL KSIKRTGFGP NAFDEWRYLD HGEPGQDNSK 
RPLNPDFVLN QPRYQGASVL LARKNFGCGS SREHAPWALQ QYGFRAIIAP SFADIFFNNC 
YKNGLLPIVL TEQQVDHLFN DTYAFNGYQL TVDLDAQVVR TGDGREYPFE IAAFRKYCLL 
NGFDDIGLTL RHADKIRQFE AERLAKQPWL NNKLVG