| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3844 |
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| Symbol | |
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| ID | 6179389 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 835745 |
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| End bp | 837154 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641683615 |
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| Product | isopropylmalate isomerase large subunit |
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| Protein accession | YP_001810527 |
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| Protein GI | 172062876 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.777096 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACAGA CTCTCTACGA CAAACTGTGG AATACCCACG TCGTCCACAC CGAGGACGAC
GGCACGGCAT TGCTCTATAT CGACCGTCAG CTGCTGCACG AAGTCACGAG CCCGCAGGCA
TTCGAAGGGC TGAACGTCGC GCACCGCCCG GTGTGGCGCA TCAGCGCGAA CCTGGCCGTG
TCGGACCACA ACGTTCCCAC CACGGATCGC AGCCACGGCA TCGCCGATCC GGTCTCGAAG
CTGCAGGTCG ACACGCTCGA CGCGAACTGC GACGCGTTCG GCATCACGCA GTTCAAGATG
AACGACGTGC GCCAGGGCAT CGTGCACATC ATCGGGCCGG AGCAGGGCGC GACGCTGCCG
GGCATGACGA TCGTCTGCGG CGATTCGCAC ACGTCGACGC ACGGCGCGTT CGGCGCGCTC
GCGCACGGCA TCGGCACGTC GGAAGTCGAG CACGTGCTCG CGACGCAAAC GCTGCTGCAG
AAAAAGAGCA AGAACATGCT CGTGAAGGTC GAGGGCGCAC TGCCGCGCGG CTGTACCGCG
AAGGACATCG TGCTCGCGAT CATCGGCAGG ATCGGCACGG CCGGCGGCAC GGGCTACGCG
ATCGAATTCG GCGGCTCGAC GATTCGCGCG CTGACGATGG AAGGCCGGAT GACCGTCTGC
AACATGGCGA TCGAAGCCGG CGCGCGCGCG GGCATGGTCG CCGTCGACGA CACGACGATC
GACTACCTGA AGGGCCGTCC GTTCGTGCCG ACCGGCGCGG AATGGGACCA GGCCGTCGAG
TACTGGCGCG AATTCAAGTC CGACGAAGGC GCGCAGTTCG ACCGCGTCGT CGAGCTGAAC
GCGGCCGAGA TCGTCCCGCA GGTCACGTGG GGCACGTCGC CGGAGATGGT CACGTCGATC
GACGGTCGCG TGCCCGATCC CGAGCGCGAG AAGGATCCGG TCAAGCGCGA CGCGATGGAG
CGCGCGCTGG CCTACATGGC GCTCGAGCCG AACACGCCGA TGGAGTCGAT CAAGGTCGAC
AAGATCTTCA TCGGTTCGTG CACGAACGCG CGCATCGAGG ACATCCGCGC GGCCGCGTAT
GTCGTGAAGA AGCTGAACCG TCGCATCGCA TCGAACGTGC GGCTCGCGAT GGTCGTGCCG
GGCTCGGGCC TCGTGAAGGC GCAGGCCGAG CGCGAAGGGC TCGACAAGGT GTTCACCGAT
GCGGGCTTCG AATGGCGCGA GCCGGGCTGC TCGATGTGCC TCGCGATGAA CGCCGACCGG
CTCGATCCGG GCGAGCGCTG CGCATCGACG TCGAACCGCA ATTTCGAAGG CCGGCAGGGC
GCGGGCGGTC GCACGCACCT CGTGAGCCCC GCGATGGCGG CGGCGGCGGC GATCGAAGGC
CACTTCGTCG ACATTCGCCA GCTGGGGTAA
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| Protein sequence | MAQTLYDKLW NTHVVHTEDD GTALLYIDRQ LLHEVTSPQA FEGLNVAHRP VWRISANLAV
SDHNVPTTDR SHGIADPVSK LQVDTLDANC DAFGITQFKM NDVRQGIVHI IGPEQGATLP
GMTIVCGDSH TSTHGAFGAL AHGIGTSEVE HVLATQTLLQ KKSKNMLVKV EGALPRGCTA
KDIVLAIIGR IGTAGGTGYA IEFGGSTIRA LTMEGRMTVC NMAIEAGARA GMVAVDDTTI
DYLKGRPFVP TGAEWDQAVE YWREFKSDEG AQFDRVVELN AAEIVPQVTW GTSPEMVTSI
DGRVPDPERE KDPVKRDAME RALAYMALEP NTPMESIKVD KIFIGSCTNA RIEDIRAAAY
VVKKLNRRIA SNVRLAMVVP GSGLVKAQAE REGLDKVFTD AGFEWREPGC SMCLAMNADR
LDPGERCAST SNRNFEGRQG AGGRTHLVSP AMAAAAAIEG HFVDIRQLG
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