Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3825 |
Symbol | |
ID | 6179650 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 817506 |
End bp | 818492 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641683596 |
Product | malate dehydrogenase |
Protein accession | YP_001810508 |
Protein GI | 172062857 |
COG category | [C] Energy production and conversion |
COG ID | [COG0039] Malate/lactate dehydrogenases |
TIGRFAM ID | [TIGR01759] malate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.377725 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTAAGC CCGCAAAGCG CGTTGCCGTC ACCGGCGCCG CAGGTCAAAT CGCATACTCC CTGCTGTTCC GCATCGCGAA CGGCGACCTG CTCGGCAAGG ACCAGCCGGT CATCCTGCAA CTGCTCGACC TCCCGCAAGC CCAAGCCGCC GTCAAAGGCG TCGTGATGGA GCTCGACGAT TGCGCGTTCC CGCTGCTCGC GGGCGTCGTG ATCACCGACG ATCCGAAGGT GGCATTCAAG GATGCAGACG TCGCTCTGCT GGTCGGCGCA CGTCCGCGCT CGAAGGGCAT GGAACGCAAG GACCTGCTGT CGGCGAACGC CGAGATCTTC ACGGTCCAGG GCGCCGCGCT GAACGAAGTC GCGAGCCGCG ACGTGAAGGT GCTGGTCGTC GGCAACCCGG CGAACACCAA CGCGTACATC GCCATGAAGT CGGCACCGGA TCTGCCGAAG AAGAACTTCA CCGCAATGCT GCGCCTCGAC CACAACCGCG CGCTGTCGCA GCTCGCCGCG AAGTCGGGCA AGCCGGTCGC ATCGATCGAG AAGCTCGCCG TGTGGGGCAA CCACTCGCCG ACGATGTACC CCGACTTCCG CTTCGCGACC GCCGAAGGCG AGTCGCTGCT GAAGCTGATC AACGACGACG TGTGGAACCG CGACACGTTC ATCCCGACCG TCGGCAAGCG CGGCGCGGCG ATCATCGAAG CGCGCGGCCT GTCGTCGGCA GCGTCGGCAG CCAACGCGGC GATCGACCAC GTGCGTGACT GGGTCCTCGG CACGAACGGC AAATGGGTCA CGATGGGCAT CCCGTCGGAC GGCTCGTACG GCATCCCCGA AGACATCATC TACGGCGTGC CCGTCGTGTG CGAAAACGGC GAGTACAAGC GCGTCGAAGG CCTGGAAATC GACGCGTTCT CGCGCGAGAA GATGGACGGC ACGCTGGCCG AGCTGCTCGA AGAGCGCGAC GGCGTCGCCC ACCTGCTGAA GAACTAA
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Protein sequence | MAKPAKRVAV TGAAGQIAYS LLFRIANGDL LGKDQPVILQ LLDLPQAQAA VKGVVMELDD CAFPLLAGVV ITDDPKVAFK DADVALLVGA RPRSKGMERK DLLSANAEIF TVQGAALNEV ASRDVKVLVV GNPANTNAYI AMKSAPDLPK KNFTAMLRLD HNRALSQLAA KSGKPVASIE KLAVWGNHSP TMYPDFRFAT AEGESLLKLI NDDVWNRDTF IPTVGKRGAA IIEARGLSSA ASAANAAIDH VRDWVLGTNG KWVTMGIPSD GSYGIPEDII YGVPVVCENG EYKRVEGLEI DAFSREKMDG TLAELLEERD GVAHLLKN
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