Gene BamMC406_3825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3825 
Symbol 
ID6179650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp817506 
End bp818492 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content66% 
IMG OID641683596 
Productmalate dehydrogenase 
Protein accessionYP_001810508 
Protein GI172062857 
COG category[C] Energy production and conversion 
COG ID[COG0039] Malate/lactate dehydrogenases 
TIGRFAM ID[TIGR01759] malate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.377725 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAGC CCGCAAAGCG CGTTGCCGTC ACCGGCGCCG CAGGTCAAAT CGCATACTCC 
CTGCTGTTCC GCATCGCGAA CGGCGACCTG CTCGGCAAGG ACCAGCCGGT CATCCTGCAA
CTGCTCGACC TCCCGCAAGC CCAAGCCGCC GTCAAAGGCG TCGTGATGGA GCTCGACGAT
TGCGCGTTCC CGCTGCTCGC GGGCGTCGTG ATCACCGACG ATCCGAAGGT GGCATTCAAG
GATGCAGACG TCGCTCTGCT GGTCGGCGCA CGTCCGCGCT CGAAGGGCAT GGAACGCAAG
GACCTGCTGT CGGCGAACGC CGAGATCTTC ACGGTCCAGG GCGCCGCGCT GAACGAAGTC
GCGAGCCGCG ACGTGAAGGT GCTGGTCGTC GGCAACCCGG CGAACACCAA CGCGTACATC
GCCATGAAGT CGGCACCGGA TCTGCCGAAG AAGAACTTCA CCGCAATGCT GCGCCTCGAC
CACAACCGCG CGCTGTCGCA GCTCGCCGCG AAGTCGGGCA AGCCGGTCGC ATCGATCGAG
AAGCTCGCCG TGTGGGGCAA CCACTCGCCG ACGATGTACC CCGACTTCCG CTTCGCGACC
GCCGAAGGCG AGTCGCTGCT GAAGCTGATC AACGACGACG TGTGGAACCG CGACACGTTC
ATCCCGACCG TCGGCAAGCG CGGCGCGGCG ATCATCGAAG CGCGCGGCCT GTCGTCGGCA
GCGTCGGCAG CCAACGCGGC GATCGACCAC GTGCGTGACT GGGTCCTCGG CACGAACGGC
AAATGGGTCA CGATGGGCAT CCCGTCGGAC GGCTCGTACG GCATCCCCGA AGACATCATC
TACGGCGTGC CCGTCGTGTG CGAAAACGGC GAGTACAAGC GCGTCGAAGG CCTGGAAATC
GACGCGTTCT CGCGCGAGAA GATGGACGGC ACGCTGGCCG AGCTGCTCGA AGAGCGCGAC
GGCGTCGCCC ACCTGCTGAA GAACTAA
 
Protein sequence
MAKPAKRVAV TGAAGQIAYS LLFRIANGDL LGKDQPVILQ LLDLPQAQAA VKGVVMELDD 
CAFPLLAGVV ITDDPKVAFK DADVALLVGA RPRSKGMERK DLLSANAEIF TVQGAALNEV
ASRDVKVLVV GNPANTNAYI AMKSAPDLPK KNFTAMLRLD HNRALSQLAA KSGKPVASIE
KLAVWGNHSP TMYPDFRFAT AEGESLLKLI NDDVWNRDTF IPTVGKRGAA IIEARGLSSA
ASAANAAIDH VRDWVLGTNG KWVTMGIPSD GSYGIPEDII YGVPVVCENG EYKRVEGLEI
DAFSREKMDG TLAELLEERD GVAHLLKN