Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3817 |
Symbol | |
ID | 6180130 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 807578 |
End bp | 809317 |
Gene Length | 1740 bp |
Protein Length | 579 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641683588 |
Product | peptidase S53 propeptide |
Protein accession | YP_001810500 |
Protein GI | 172062849 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4934] Predicted protease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0534043 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.750552 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAGGA ACACCTGGTT TGCGCTGCCC CTTCCGTCGC CCCGCCACCT CGCGTGCGCG GTACCGCTCG TGTTCGCCGC CGCCGCGGCC CATGCGGCGA CGGATTGGGT CGATACCCAT ACGAAAGCCT TTCTGACCGG CCCGCAGTTG ATGGCGCGCA GCGCGGCGCC GTCGCTCGAG CTCGCGGCCG GCGAGACGAC GGACATCGTC GTCAGCCTGA AGCTGCGCAA CGCCGCGCAG CTCAAGCAAC TCGCGCACGA CGTGAACCGG CCCGGCAACG CGCATTACCG CCAGTACCTC ACGCACGAAC AGTTCCTCGC CGGCTACGCG CCGACCGAAG CCCAGGTCAA GTCGGTCGTC GACTATCTGC GCAAGAGCGG CTTCGTGAAC ATCGAAGTCG CGCCGAACCG GCTGCTGGTG TCCGCGCACG GCACGACCGG CACGGTGAAG ACCGCGTTCA ACACGTCACT CGTTCATTTC GAGTACGCGG GCCGCTCCGG CTTCGCGAAC GCGTCGACCG CGCAGGTGCC GCATGCGCTC GGCGACGTCG TCGGCTCGGT GCTCGGGCTG CAGAACGTCG CACGCGCACG GCCGCTGCTG CGCATCGGCA ACGTCGCGAA GCCGCAGGCG CTCGCGGCCG GCACGGCCAC CGGCCACTAT CCGAAGGAAT TCCCGGGCCT CTACAACGCG ACCGGCGTGC CGACCGCGGC CGGCGTGACC GTCGGCATCA TCACGATCGG CGGCGTGTCG CAAACGCTGC AGGACCTCAG GCAGTTCACG TCGAGCAACG GTTACGGCAC GGTCACGACC CAGACCGTCA AGACCAACGG CACCGGCACG AGCGGCAGCT ACAGCGACGA CCAGGACGGC CAGGGCGAAT GGGATCTCGA CAGCCAGTCG ATCGTCGGCT CGGCCGGCGG CCAGGTCGGC AAGCTCGTGT TCTACATGGC GGACCTGAAC GCCGCCGGCA ACACCGGGCT CACGCAGGCA TTCAACCGCG CGGTGTCGGA CAACACCGCG AAGGTGATCA ACGTGTCGCT CGGGTGGTGC GAGACCGATG CGAACGCGGA CGGCACGCTC GACGCCGAAG AGCAGATCTT CACGACGGCC GCCGCGCAAG GACAGACGTT CTCGGTGTCG TCGGGCGACG AAGGCGTGTA CGAGTGCAAC AACCGCGGCT ATCCGGACGG CGGGAACTAC ACGGTGTCGT GGCCGGCCGC GTCGCCGCAC GTGCTCGCGA TCGGCGGCAC GACGCTCTAT ACGACGTCGG CGGGCGCGTT CTCGAACGAA ACGGTGTGGA ACGAGGGGCT CGACGGCAAC GGCAAGCTAT GGGCCACGGG CGGCGGCGTC AGCTCGATCC TGCCGGCGCC GTCGTGGCAG TCGGGCAGCA ACCGTCAGTT GCCCGATGTA TCGTTCGACG CCGCGCAAGG CACGGGCGCG TACATCTACA ACTACGGCCA GTTGCAGCAG ATCGGCGGCA CGAGCCTTTC CGCGCCGATC TTCACCGGCT TCTGGGCGCG TCTGCTCGCG GCAAACGGCA CGGGCCTGGG CTTCCCGGCC GGCAATTTCT ATGCGGACAT TCCGTCGAAC CCGTCGCTCG TGCGCTATGA CGTCGTCTCG GGCAACAACG GCTATCAAGG GTATGGCTAC AGCGCAGGCA GCGGCCGGGA TCTGACGACC GGCTTCGGCA GCCTGAACAT CGCGAACCTC AACAAGCTGA TCCAGACGGG CGGCTTCTGA
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Protein sequence | MKRNTWFALP LPSPRHLACA VPLVFAAAAA HAATDWVDTH TKAFLTGPQL MARSAAPSLE LAAGETTDIV VSLKLRNAAQ LKQLAHDVNR PGNAHYRQYL THEQFLAGYA PTEAQVKSVV DYLRKSGFVN IEVAPNRLLV SAHGTTGTVK TAFNTSLVHF EYAGRSGFAN ASTAQVPHAL GDVVGSVLGL QNVARARPLL RIGNVAKPQA LAAGTATGHY PKEFPGLYNA TGVPTAAGVT VGIITIGGVS QTLQDLRQFT SSNGYGTVTT QTVKTNGTGT SGSYSDDQDG QGEWDLDSQS IVGSAGGQVG KLVFYMADLN AAGNTGLTQA FNRAVSDNTA KVINVSLGWC ETDANADGTL DAEEQIFTTA AAQGQTFSVS SGDEGVYECN NRGYPDGGNY TVSWPAASPH VLAIGGTTLY TTSAGAFSNE TVWNEGLDGN GKLWATGGGV SSILPAPSWQ SGSNRQLPDV SFDAAQGTGA YIYNYGQLQQ IGGTSLSAPI FTGFWARLLA ANGTGLGFPA GNFYADIPSN PSLVRYDVVS GNNGYQGYGY SAGSGRDLTT GFGSLNIANL NKLIQTGGF
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