| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3812 |
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| Symbol | |
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| ID | 6179616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 801425 |
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| End bp | 802519 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641683583 |
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| Product | spermidine/putrescine ABC transporter ATPase subunit |
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| Protein accession | YP_001810495 |
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| Protein GI | 172062844 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.237281 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTCCG ATGATGTGAT CGTCAGCTTT CGCGGCGTGC GGAAGACCTA CGACGGGGAG
ACGCTGGTCG TCAAATCGCT CGACCTCGAC ATCCACCGAG GGGAATTCCT GACGCTGCTC
GGGCCGTCCG GCTCGGGCAA GACCACCTGC CTGATGATGC TGGCGGGCTT CGAGTTCCCG
ACGGGCGGCG AGATCTGGCT CGACGGCGAA CTGCTGAATA CCGTGCCGCC GCACAAGCGC
AACATCGGCA TGGTGTTCCA GAACTACGCG CTGTTCCCTC ACCTGACGGT CGAGCAGAAC
GTCGCGTATC CGCTGACGGT GCGCAAGCTG TCGGCCGCCG AGCGCGCGGA GCGCGTCGCG
CATGCGCTGA AGATGGTGCA GATGGAACGC TTCGCGAAGC GCTATCCGGC GCAGTTGTCG
GGCGGCCAGC AGCAGCGCAT CGCGCTCGCG CGTGCCCTCG TGTTCGAGCC GAAGCTGGTG
CTGATGGACG AGCCGCTCGG CGCGCTCGAC AAGCAGTTGC GCGAACACAT GCAGTACGAA
CTGAAGGCGC TGCACGAGAA GCTCGGCGTG ACCTTCGTGT ACGTGACGCA CGACCAGGGC
GAGGCGTTGA CGATGTCCGA TCGCGTCGCC GTGTTCGACA AGGGCATCGT GCAGCAGCTC
GATACCGTCG ATTGCCTGTA CGAATCGCCG TGCAACGAAT TCGTCGCGAA CTTCATCGGC
GACAGCAACC GGCTGCGCGG CACCATCGCG CGCGTCGACG GCGACTTCTG CGAATTCCGG
CTCGACGACG GCACGCAGCT CGTCGGGCGC CGGATCGGCG ATGCGGCCGA AGGCGCGCCG
GCCGTCGCCT GCATCCGCCC CGAACGCATG AGCCTTGCCG CCAACGGGCA CGCGAATGGC
GCCGCCAACC GCGTGACCGG CGAGGCGCGC AGTCTCATCT ATTTCGGCGA TCACGTGCGC
ATGCGCTGCG CGCTGCCGGG CCAGGAGGAA TGCTTCGTGA AGGTGCCGCT CGGCACGGAT
GCGCTCCACG CGTTCGCGCC CGGCGCACCG GTCGCGCTCG CCTTCGCGCC CGAGCACCTG
CGCGTGTTCG CGTGA
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| Protein sequence | MKSDDVIVSF RGVRKTYDGE TLVVKSLDLD IHRGEFLTLL GPSGSGKTTC LMMLAGFEFP
TGGEIWLDGE LLNTVPPHKR NIGMVFQNYA LFPHLTVEQN VAYPLTVRKL SAAERAERVA
HALKMVQMER FAKRYPAQLS GGQQQRIALA RALVFEPKLV LMDEPLGALD KQLREHMQYE
LKALHEKLGV TFVYVTHDQG EALTMSDRVA VFDKGIVQQL DTVDCLYESP CNEFVANFIG
DSNRLRGTIA RVDGDFCEFR LDDGTQLVGR RIGDAAEGAP AVACIRPERM SLAANGHANG
AANRVTGEAR SLIYFGDHVR MRCALPGQEE CFVKVPLGTD ALHAFAPGAP VALAFAPEHL
RVFA
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