| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3808 |
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| Symbol | |
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| ID | 6181519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 795322 |
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| End bp | 797385 |
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| Gene Length | 2064 bp |
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| Protein Length | 687 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641683579 |
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| Product | TonB-dependent copper receptor |
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| Protein accession | YP_001810491 |
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| Protein GI | 172062840 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01778] TonB-dependent copper receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.494445 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.660377 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAAAC TCACCATTCC CGCGCTGGCC GTCGGCGCGA TGAGCGCGGC GGCCGCCGCT
GAAGCCGCAC GTGCGGCCGG TGCGCCGACG GACGACGCGG CCGTGCTGCT GCCGCCCGTC
GAAGTCGTCG CGTCGCCGCT GACGACACCG CTCGTCATCG TCACGGATCC GAAGACGCCG
CGCCAACCGT TGCCGGCCAG CGACGGCGCC GACTACCTGA AGACGATCCC CGGCTTCACG
TCGATGCGCA GCGGCGGGAC CAACGGCGAC CCCGTGCTGC GCGGGATGTT CGGTTCGCGG
CTGAACATTC TTGCGAACGG GATGCCGACG CTCGGTGCGT GTCCGAACCG GATGGACGCG
CCGACCTCGT ATATCGCGCC GGAAAGCTAT GACAAGGTCA CGGTCGTGAA GGGCCCGCAG
ACCGTGCTGT ACGGCCCCGG CGCATCGGCC GGCACCGTGC TGTTCGAACG CGTGACGCCG
CGTTTCGAGC GCCCAGGCAT GCGTTTCGAC GGCAGCGTGG TCGGCGGGTC GTTCGGCCGC
AACGACCAGA ACGTCGACGT GACGGCCGGC ACGCCGGACG TCTATGGCCG CGTGAGCGCG
AACCACGCGC ACGCGCAGGA CTACAAGGAC GGCAACGGCA ACACGGTGCC GTCGCAATGG
GACAAGTGGA ACGCGGATGC GGCGCTCGGC TGGACGCCCG ACGATCATAC GCGCGTCGAA
CTGACGGCCG GCACCGGTGA CGGTTATGCC CGCTATGCGG GGCGCGGGAT GGACGGCGCG
CATTTTCGCC GCGAGACGTT CGGCCTGTCG TTCGACAAGC GGCATCTCGG CGACGTGCTC
GAGCGCATCG AGGCGCGCGT GTACTACAAC GAAGCCGACC ATGTGATGGA CAACTACACG
CTGCGACAGC CCGACCCGAC CAGCAGCATG CCGATGAGGA TGGCATCCGA AGTGCGGCGC
CGCACGCTCG GCGCGCGGGC GGCGGCGACG TTTCGTTTCG GCGACGACTT CAAGCTCGTG
ACCGGCGTCG ACGCGCAGTC GAACCGGCTC GACGCGCGCT CGGCGATGGG GCGGCAGAAC
TACGGCGACC AGCCGTGGGA TGCGCAGGCG ACGATGTGGA ATGCGGGCGC GTTCGGCGAG
CTGACGTGGT ACGCGAGCGA TGCGGCGCGC GTGATCGGCG GCGCGCGGGT CGACTACGCG
AGCGCCCGCG ACAAGCGTGC GACGACGAGC GGAATGATGG CGAGCAAGCC GAATCCCACC
TTCGACGACG ATCGCGCGCG CGTGCTGCCG AGCGGTTTCG TGCGCTACGA GCGCGATCTC
GCGTCGCTGC CGGTCACGTG GTACGCGGGC GTCGGTCATG CGGAACGCTA TCCGGACTAC
TGGGAGCTGT TCTCCGCGAA GCGCGGGCCG GCCGGTTCGG TCAATGCGTT CTCGGCGGTG
CAGCCGGAGA AGACCACGCA GCTCGACATC GGCGCGCAGT ACAAGAGCGA CCGGGTCGAT
GCGTGGGTGT CGGCCTACGC GGGCTATGTG CAGGACTACA TCCTGTTCAA TTACGCGGCC
GGGATGATGG GCCCGACCAC ACAGGCGACC AACGTCAACG CGCAGATCTT CGGTGGCGAA
GCCGGTGTGT CGTGGCGGCC AGTCGCACCG TTGCGCGTCG AGACGTCGCT TGCGTATGCA
TGGGGGCGCA ACGCGACGAG CGGCGATCCG TTGCCGCAGA TGCCGCCGCT CGAGGCGCGC
GTCGGGCTCG AATACACGCG CGGCGCATGG TCGGCCGGCG GCCTGTGGCG GATCGTTGCG
CCGCAGCATC GCTATGCGCT GAACGAGGGC AACGTGGTCG GCAAGGACTT CGGTCCGAGC
GCCGGATTCG GCGTGTTGTC GCTGCATGCG CAGTACAACG TCAGCAAGAA GGTGCAGATC
TCGGTCGGCG TCGACAACCT GCTGGACAAG GCCTATGCCG AGCACCTGAA CCTCGCCGGC
AACGCGGGCT TCGGCTATCC GGCGAACGCG CCGGTGATGG AGCCGGGGCG TACGGCATGG
GTGCGCGTGA GCGCGAAGCT GTAA
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| Protein sequence | MLKLTIPALA VGAMSAAAAA EAARAAGAPT DDAAVLLPPV EVVASPLTTP LVIVTDPKTP
RQPLPASDGA DYLKTIPGFT SMRSGGTNGD PVLRGMFGSR LNILANGMPT LGACPNRMDA
PTSYIAPESY DKVTVVKGPQ TVLYGPGASA GTVLFERVTP RFERPGMRFD GSVVGGSFGR
NDQNVDVTAG TPDVYGRVSA NHAHAQDYKD GNGNTVPSQW DKWNADAALG WTPDDHTRVE
LTAGTGDGYA RYAGRGMDGA HFRRETFGLS FDKRHLGDVL ERIEARVYYN EADHVMDNYT
LRQPDPTSSM PMRMASEVRR RTLGARAAAT FRFGDDFKLV TGVDAQSNRL DARSAMGRQN
YGDQPWDAQA TMWNAGAFGE LTWYASDAAR VIGGARVDYA SARDKRATTS GMMASKPNPT
FDDDRARVLP SGFVRYERDL ASLPVTWYAG VGHAERYPDY WELFSAKRGP AGSVNAFSAV
QPEKTTQLDI GAQYKSDRVD AWVSAYAGYV QDYILFNYAA GMMGPTTQAT NVNAQIFGGE
AGVSWRPVAP LRVETSLAYA WGRNATSGDP LPQMPPLEAR VGLEYTRGAW SAGGLWRIVA
PQHRYALNEG NVVGKDFGPS AGFGVLSLHA QYNVSKKVQI SVGVDNLLDK AYAEHLNLAG
NAGFGYPANA PVMEPGRTAW VRVSAKL
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