Gene BamMC406_3806 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3806 
Symbol 
ID6181316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp794112 
End bp794648 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content63% 
IMG OID641683577 
Productcytochrome B561 
Protein accessionYP_001810489 
Protein GI172062838 
COG category[C] Energy production and conversion 
COG ID[COG3038] Cytochrome B561 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.131783 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.748231 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAACA TCCTCGCGAA ACAGACGCGC TACAGCTCGC CTGCGATCTT CTTTCACTGG 
ATCATCTTCC TGCTGGTGGC GCTGGCCTAC CTGGCCATCG AGATTCGCGG ACCGAAAGGC
AGCGACAGTC GCGCGTTCTG GATGAACGTG CACTTGCTCG CGGGTACGTC GGTGCTCGTG
CTCTCGGTGC TGCGCGTGTT GTGGCGCGTG GTCAGCCGCG TGCCGGAGCC CATCGTGCAG
GCGCCGCTGC TCAAGTGGCT GTCGAAGCTC GCGCATTTCG CGCTGTACGT GTTCATCATT
GCCCAGCCGC TGCTCGGCAT CATGATGATC AACATGGGCG GCAAGCCCGT GTCGCTCGAC
TGGATCGGCG TGTCGTTCAC GCTGTTCGGT CCGGACAAGG CGCTGCGGCC GACGATCAAG
GAGGTCCACG AACTGCTCGG CAATGCGTTC TACTTCGTGA TCGGGCTGCA TGCGCTGGCC
GCGCTTTATC ACCATTTCGT GCGGCGCGAC GACGTGCTGC GCCGCATGGC GCCGTGA
 
Protein sequence
MRNILAKQTR YSSPAIFFHW IIFLLVALAY LAIEIRGPKG SDSRAFWMNV HLLAGTSVLV 
LSVLRVLWRV VSRVPEPIVQ APLLKWLSKL AHFALYVFII AQPLLGIMMI NMGGKPVSLD
WIGVSFTLFG PDKALRPTIK EVHELLGNAF YFVIGLHALA ALYHHFVRRD DVLRRMAP