| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3798 |
|---|
| Symbol | |
|---|
| ID | 6180423 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | - |
|---|
| Start bp | 785976 |
|---|
| End bp | 786935 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641683569 |
|---|
| Product | luciferase-like monooxygenase |
|---|
| Protein accession | YP_001810481 |
|---|
| Protein GI | 172062830 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
|---|
| TIGRFAM ID | [TIGR03571] luciferase-type oxidoreductase, BA3436 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.628153 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.318951 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCCGC CCGCCTTCGA CCGCGCCGAC GTCGCGCATC GCGTCTTCTC GGCCGAGCGA
CTATCGATCG GCCTGACGTT GCCGCTGCTG CGCAGCGGTC ACACCATCGC GGATTTCAAC
GAGCAGCTCG AACTCGCGGC GCTCGCCGAT TCGCTCGGCT TTCGCGCGCT GTGGATTCGC
GACGTGCCGC TGAACAGCGC CGACTATCCC GACCCGGTCG GGCATCTCGA TCCGTGGGTG
CTGCTCGGCG CGCTCGCGGC GCGCACGCGC CGGATCGTGC TGGCGAGCGG CGCGATCGTG
CTGCCGCTGC GTCATCCGCT GCATGTCGCG AAGGGCGCGC TGTCGGTCGC GACGCTGTCC
GGCGGACGCT TCATCCTCGG CCTCGGCTCC GGCGACCGGC CGCCCGAATA TGCGGCGTTC
GGCGTCGACG CGCAAACGCG GCGCGACCGA TATCGCCGGC ATTGGGACAT CGTCGCGGCC
GCGCTCGCCG TGCCGTCCCG CGTGCTGCCC GACGAAACGC CGCCCGACGC ACCCGACTTC
ACGCTGCTGC CGCGCGGCGA TGACGCGGTG CCGATGCTTG CGGTCGGCTC CGGCGGACAA
AGCGTCGACT GGATCGCACG GAACGCGATC GGCTGGATGA CGTACCACCG CGATCCGGAC
ACGCAGCGTG CGCGCCATTC GATGTGGCGA GCGGCGGTCG AGCGGCTCGC ACAACCGGCC
TTTCGCGCGT TCGGCGTGTC GATGCGGCTC GATCTCGATG CGAATCGCGA TGCGCCGGCC
ACCGCGCTGT CGCTCGGTTA TGCAACCGGA CGCAACGCGC TGATCGGCAT TCTGCGGGAC
ATGCGCGCGG CCGGCACGCA CCATGTCACG CTGAATCCCG GCTCGGACCG GCCGGTGCGC
GAGGTCATCG AGGAACTCGC CGAGCACGTG CTGCCGGTCT TTCACGACGA GCCAGGCTGA
|
|---|
| Protein sequence | MPPPAFDRAD VAHRVFSAER LSIGLTLPLL RSGHTIADFN EQLELAALAD SLGFRALWIR
DVPLNSADYP DPVGHLDPWV LLGALAARTR RIVLASGAIV LPLRHPLHVA KGALSVATLS
GGRFILGLGS GDRPPEYAAF GVDAQTRRDR YRRHWDIVAA ALAVPSRVLP DETPPDAPDF
TLLPRGDDAV PMLAVGSGGQ SVDWIARNAI GWMTYHRDPD TQRARHSMWR AAVERLAQPA
FRAFGVSMRL DLDANRDAPA TALSLGYATG RNALIGILRD MRAAGTHHVT LNPGSDRPVR
EVIEELAEHV LPVFHDEPG
|
|---|
| |