| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3795 |
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| Symbol | |
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| ID | 6180653 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 781289 |
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| End bp | 782410 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641683566 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001810478 |
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| Protein GI | 172062827 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.327061 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGACGT CGCAACCTCC GTCACTGAAA GAAAATCGTC AGGAAACCGC AGCATCGCCG
CGCAACGTCG GTTCGAGGCG GCGGCGCATC CTGATCGCCG TCGCCGTGGT CGCGGCGATC
GGCGGCGCCG TGTCGCTGGG CCGCTGGTGG ACGGTCGGCC GCTTCATCGA AAGCACCAAC
GACGCCTATC TGCAGGCCGA TAACATGACG GCCGCGCCGA AGGTCGCCGG TTACGTGACC
GACGTATACG TGCGCGACAA CCAGGTGGTC AAGGCCGGCG ACCCGCTCGT GCGGCTCGAC
ATCCGCCAGT ACCAGGTGGT GCTCGCGCAG TCGACCGCGA CCGTCGACGC GCGCCGCGCC
GACATCGCGC GCGCGGAAGC CGACATCAGC CAGCAGCGCG CGAACCTCGA GCAGGCCGAA
GCGCAGGCGA AGGTGTCGCA GATCAACGCA CGGCACGCAA GCGACGAATA CGCACGCTAC
GCGCCGCTCG CGGCGACCGG CGCCGAGACG CACGAGCGCG TGGCCGACCT GAAGAGCACG
CGCGACCAGG CCGTCGCGAC GCTCGCCGCG AACACTGCGT CGATCGCCGC CGCCCGCACG
CAGATCGCGT CGTTCACCGC GCAGCTGCAG CAGGCGCGCG CGCAGCTCGA AGCCGCGCAG
GCCAGCGCGG CGCAGGCACG GCTCGACCTC GACAACACGA TCGTGCGCAG CACGCTCGAC
GGCCGCGTCG GCGACCGCAC GGTGCGCGTC GGCCAGTACG TGCAGCCCGG CACGCGCCTG
CTGACCGTCG TGCCGGTGGA CGCGATCTAC CTCGTCGCGA ACTTCAAGGA AACGCAGATC
GGCCGGATGC GCATCGGCCA GCCCGTCGAA CTGCACGTCG ACGCGCTGCC GGACGACACG
CTCAGCGGCA CCGTCGACAG CTTCGCACCG GGCACCGGCG CGCAATTCGC GCTGCTGCCG
CCCGAAAACG CGACCGGCAA CTTCACGAAG ATCGTGCAGC GCGTGCCGGT GCGCATCCGC
CTCGCCGCGA ACGCGCGTGC GCCACGCATG CTGTTGCCGG GGCTGTCCGT GACCGTCGAC
GTCGACACGC GCCCGGACGA CAACGAGAAA CGCCATGGCT GA
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| Protein sequence | MSTSQPPSLK ENRQETAASP RNVGSRRRRI LIAVAVVAAI GGAVSLGRWW TVGRFIESTN
DAYLQADNMT AAPKVAGYVT DVYVRDNQVV KAGDPLVRLD IRQYQVVLAQ STATVDARRA
DIARAEADIS QQRANLEQAE AQAKVSQINA RHASDEYARY APLAATGAET HERVADLKST
RDQAVATLAA NTASIAAART QIASFTAQLQ QARAQLEAAQ ASAAQARLDL DNTIVRSTLD
GRVGDRTVRV GQYVQPGTRL LTVVPVDAIY LVANFKETQI GRMRIGQPVE LHVDALPDDT
LSGTVDSFAP GTGAQFALLP PENATGNFTK IVQRVPVRIR LAANARAPRM LLPGLSVTVD
VDTRPDDNEK RHG
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