| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3794 |
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| Symbol | |
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| ID | 6180652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 779710 |
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| End bp | 781296 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641683565 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_001810477 |
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| Protein GI | 172062826 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.354181 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGATA CCGCCGCCAC CCCGCCCGCG CCGCCTCACG AAGGCCGCGC GAGCGTCACC
GACTGGATCG CGGTCGCCGC CGGCGCGCTC GGCGCGCTGA TGGCGACGCT CGACATCTCG
ATCACGAACT CCGCGCTGCC GCAGATCCAG GGCGAAATCG GCGCGACCGG CACCGAGGGC
ACGTGGATCT CGACCGGCTA CCTGATGTCG GAAATCGTGA TGATCCCGCT CGCCGCGTGG
CTCACGCGCG TGTTCGGGCT ACGCAACTTC CTGCTGACGA ATGCCGCGCT GTTCATCGCC
TTCTCGATGA TGTGCGGCTG GTCGAATTCG CTTGCGATGA TGATCGCCGG GCGCATCGGC
CAGGGCTTCA CGGGCGGCGC GCTGATCCCC ACCGCGCAAA CCATCATCCG CACGCGGCTG
CCGCTGTCGC AGCTGCCGGT TGGGATGACG CTGTTCGGGC TGATCGTGCT GCTCGGCCCG
CTGTTCGGCC CCGTGCTCGG CGGCTGGCTC GCGGAGAACG TCAGCTGGAG CTGGTGCTTC
TTCCTGAACC TGCCGGTGTG CCTGCTGCTG ATGGCGCTGC TGGTGTTCGG GCTGCCGTCC
GACCGTCCGC AATGGAACAC GTTCTTCAAC GCGGACTGGC TCGGGATCGC GGGCCTCGCG
ATCGGGCTGA GCTCGCTGAC CGTGGTGCTC GAGGAAGGCC AGCGCGAACG CTGGTTCGAG
TCGCAGATGA TCGTCACGCT GAGCTGCGTG TCGCTCGCCG GGATGATCCT GATCGCGTTG
TCGCAGCGGT TCGCGCAGCG GCCGATCATG CGCCTGTCGC TGATGCGCAA TCCGCGCTAT
GCGAGCGTGA TCGTGATCGT GTCCGCGGTG GGCGCCGGGC TGTACGGCGT GTCGTACCTG
CTGCCGCAGT TCCTCGCGAT CGTCGCGGGC TACAACGCCG AGCAGGCGGG CGCGATCATG
CTGCTGTCGG GCCTGCCCGC GTTTCTCGTG ATGCCGATCC TGCCGCGCCT GCTCGGCAAG
GTCGACTTCC GCGTTCTCGT GATCTCGGGG CTGCTGCTGT TCTGCCTGAG CTGCATGCTC
GACATCGGCC TGACCGCGCA GAGCGTCGGC CATGATTTCG TGTGGTCGCA GCTGATTCGC
GGCGTCGCGC AGATGCTCGC GATGATGCCG CTGAACCAGG CGTCGATGGC CGCCGTCGCG
CGCGAGGACT CGGGCGACGC GGCCGGGCTC TACAACATGG CGCGCAACCT CGGCGGCTCG
ATCGGGCTCG CGATCATCGG CACCGTGATC GACCGGCGCA CGACCTTCCA TGCGGCCGCG
CTGCGCGAAT CGGTCAGCGC CAATTCGCTG ATCGGGCAGG AACGGTTGTC GGCCTACGCG
GCGAACTGGT TCGCGCACAC CGGCGACCTC GCGTATTCGC ATCTGCGTGC GCTGGGCCAG
CTCGCGCAGC AGATCCAGAT CCAGGCCATC GTGATGACCT ATTCCGAAAC CTTCTACCTG
CTGGGTCTCG CGCTGCTCGC GTGCGTGCCG CTCGCGCTGC TGCTGAAGAC GCCGCGCGGT
CCGCAGCCGA TGTCGTCCGG CCATTGA
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| Protein sequence | MADTAATPPA PPHEGRASVT DWIAVAAGAL GALMATLDIS ITNSALPQIQ GEIGATGTEG
TWISTGYLMS EIVMIPLAAW LTRVFGLRNF LLTNAALFIA FSMMCGWSNS LAMMIAGRIG
QGFTGGALIP TAQTIIRTRL PLSQLPVGMT LFGLIVLLGP LFGPVLGGWL AENVSWSWCF
FLNLPVCLLL MALLVFGLPS DRPQWNTFFN ADWLGIAGLA IGLSSLTVVL EEGQRERWFE
SQMIVTLSCV SLAGMILIAL SQRFAQRPIM RLSLMRNPRY ASVIVIVSAV GAGLYGVSYL
LPQFLAIVAG YNAEQAGAIM LLSGLPAFLV MPILPRLLGK VDFRVLVISG LLLFCLSCML
DIGLTAQSVG HDFVWSQLIR GVAQMLAMMP LNQASMAAVA REDSGDAAGL YNMARNLGGS
IGLAIIGTVI DRRTTFHAAA LRESVSANSL IGQERLSAYA ANWFAHTGDL AYSHLRALGQ
LAQQIQIQAI VMTYSETFYL LGLALLACVP LALLLKTPRG PQPMSSGH
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