| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3792 |
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| Symbol | |
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| ID | 6179278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 775668 |
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| End bp | 777503 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641683563 |
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| Product | pseudomonalisin |
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| Protein accession | YP_001810475 |
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| Protein GI | 172062824 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4934] Predicted protease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.266774 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.382747 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCAGG TTGCAGACAA GAAACAAAAG CACATCCGCA TCGTCAAGCT CGCGTTCGCC
GCCGCGGCAG CCGCTTCGTT CGGCATGACG GCCGTCCATG CCGCACCGGC CGCCGGCTGG
ACGGAAACGC GCACCAAGGG ATTCCTGCCG CTCGTCCAGC AGGGTGAAAG CAGCAGTACC
GCCGGCGCAC CGGCGGCCAG CACCGCCGCC GCTGCCGCGA CTGCCACCGA GATGGCGCCC
GGCGAATCGG TGGACATCGT GCTCGGTTTG AACCTGCGCA ACGAAGCGCA ACTCGACCAG
TACCTGCGCG ACCTGCATAC GCCCGGCTCG CCGCACTACA AGCAGTTCCT CACGCCGGCG
CAATTCGCCG CGCAGTACGC GCCGACCGAC CAGCAGGTCG CCTCCGCCGT CGCGCACCTG
CGCAAGGCCG GCTTCGTCAA CATCGTGGTC GCGCCGAACC GCCTGCTCGT GTCGGCATCC
GGCACCGCGG CAACAATCAA GTCGGCGTTC CGCACGACGC TCAAACGCTT CACGCACAAC
GGCCGCAGCG TCTACGCGAA CACCGACGCC GCGCAGGTGC CGAACGCGAT CGGCGGGATC
GTCGGCGCCG TGCTCGGCCT GCAGAACGTC GAGCTCATGC ATACCGGCGC GGGCAGCAAG
CCGCAAGGCA ACACCAGCAA CCTGACGATC CCGGCGGGCG CATCCGCGGT GCCGCACAAC
CCGACCGAGT TCTCGTCGCT TTATGGCGGC GACGGTACGC CGACGGCCTC GCAGACCACG
GTCGGCATCA TTTCCGAAGG CGACCTGTCG CAGACGGTCA GCGACCTCAA CACGTTCGCC
GCGAACAACG GCCTCGGCAC GATCAGCAGC AGCGTCGTCC ACACAGGGCC GTCAGGCAGT
TCGTACACCG ATACATCCGG CACCGTCGAA TGGAACCTCG ACAGCCAGTC GATCGTCGGC
GCTGCCGGCG GCAGCGTGAA ACAGGTCGTG TTTTACGTGG CGCCGTCGAT GACGCTTACG
GCGATCACCG CCGCGTACAA CAAGGCGGTG AGCGACAATG TCGCGAAGGT CATCAACGTG
TCGCTCGGCG TGTGCGAATC GTCCGCGTAC AGCACCGGCT CCCAGGCGAC CGACGACACG
ATCTTCAAGC AGGCGGTCGC GCAGGGGCAG ACCTTTTCGG TGTCGGCCGG CGACCACGGC
GCATACGAAT GCGCGAGCGG CAAGCCATCG CGCTCGACCT ACACGGTGAG CGAACCCGCG
ACGTCGCCTT ACGTGATCGC GGTGGGCGGC ACGACGCTGT TCACCAATAC GTCGACCAAC
GCGTACAACA GCGAAATCGT GTGGAACGAT CCGAGCTGGC AGCAGGGCAC CGTGTGGTCG
ACGGGCGGCG GCTACAGCAA GTACGAAGCC GCGCCGTCGT GGCAATCGTC GAGCCTCACC
GGATCGACCA AGCGCGCGCT GCCGGACATC GGCTTCGACG CCGACCTGCG CACCGGCGCG
ATTCTCGTGG TGAACGGCCA GACGTCAGAC ACGCTATGGG GCTCGGGCTA CCTGAACAAC
GAAGGGGGCA CGAGCCTCGC CGCGCCGATC TTCACCGGCA TCTGGGCACG GCTGCAATCG
GCGAACAACA ACGCGCTCGG CTTCCCGGCG TCGAGCATCT ACAAGTACTT TCCGAGCAAC
GCGGCCCTGC TGCACGACGT GACGTCCGGC AACAACGGCA GCGGATCGTA CGGCTACAAC
GCAAAGGCCG GCTGGGACGC GACGACGGGC TTCGGCAGCG TGAACATCTC GAAGCTGAAC
ACGTTCATCC AGAGCACGTC GGATTTCGCG CGCTGA
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| Protein sequence | MNQVADKKQK HIRIVKLAFA AAAAASFGMT AVHAAPAAGW TETRTKGFLP LVQQGESSST
AGAPAASTAA AAATATEMAP GESVDIVLGL NLRNEAQLDQ YLRDLHTPGS PHYKQFLTPA
QFAAQYAPTD QQVASAVAHL RKAGFVNIVV APNRLLVSAS GTAATIKSAF RTTLKRFTHN
GRSVYANTDA AQVPNAIGGI VGAVLGLQNV ELMHTGAGSK PQGNTSNLTI PAGASAVPHN
PTEFSSLYGG DGTPTASQTT VGIISEGDLS QTVSDLNTFA ANNGLGTISS SVVHTGPSGS
SYTDTSGTVE WNLDSQSIVG AAGGSVKQVV FYVAPSMTLT AITAAYNKAV SDNVAKVINV
SLGVCESSAY STGSQATDDT IFKQAVAQGQ TFSVSAGDHG AYECASGKPS RSTYTVSEPA
TSPYVIAVGG TTLFTNTSTN AYNSEIVWND PSWQQGTVWS TGGGYSKYEA APSWQSSSLT
GSTKRALPDI GFDADLRTGA ILVVNGQTSD TLWGSGYLNN EGGTSLAAPI FTGIWARLQS
ANNNALGFPA SSIYKYFPSN AALLHDVTSG NNGSGSYGYN AKAGWDATTG FGSVNISKLN
TFIQSTSDFA R
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