Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3775 |
Symbol | |
ID | 6181121 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 746899 |
End bp | 747783 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641683545 |
Product | polyprenyl synthetase |
Protein accession | YP_001810458 |
Protein GI | 172062807 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0109984 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0572479 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACATTCG AACAATGGAT GCGGTCCGTG CTTGACCGTG TCGAGGACGC ACTGGGCCAC TATTTGCCGG CCGAAAACGT GGTGCCCACG CAACTCCACG AAGCGATGCG CTACGCGGTC CTCGGCGGCG GCAAGCGCGT TCGCCCGCTG CTGTGCCATG CAGCAGGCGA ACTGACCGGT GCGACGGAAG CGGCGCGCAA TGCGGCGGCG GCGGCGCTGG AGATGATCCA CGTCTATTCG CTCGTGCACG ACGACATGCC GTGCATGGAC GACGACGCGC TGCGTCGCGG CAAGCCGACC GTGCACGTGC AGTACGACGA GCCGACGGCG TTGCTGGTCG GCGACGCGCT GCAGTCGCAG GCATTCGTCG CGCTGACCGA CGTCGATGCG CTGTCGCCGG TGCAGCAGGC CGCGCTCGTG CGCGAGCTGG CGCTCGCGAG CGGCTCGATC GGCATGGCCG GCGGGCAGGC GATCGACCTG GCGAGCGTCG GCCTGAAGCT GACGCGCGAG CAGCTCGAGA AGATGCACCG GATGAAGACG GGTGCGCTGC TGCGCGCGGC CGTGCGGATG GGCGCGCTGG CCGGCGACAC GCCGTCGGCG GAAACGCTGG CCGCGCTCGA CGTCTACGCA GCGGCCGTGG GCCTGGCCTT CCAGGTCGTC GACGACATTC TCGACGTCAC GACCGATTCG GCGACGCTCG GCAAGACGGC CGGCAAGGAT GCGGCAAACG ACAAGCCGAC CTACGTATCG ATCCTCGGCC TCGACGCATC GCGTGAGCTC GCAGCCCAGC TGCGCGCGGA AGCACACGAT GCGCTGAAAC CGTTCGGCGC ACGCGCACAG CGTCTCGCCG AACTTGCCGA CCTGGTGGTG AACCGGGTCA GCTGA
|
Protein sequence | MTFEQWMRSV LDRVEDALGH YLPAENVVPT QLHEAMRYAV LGGGKRVRPL LCHAAGELTG ATEAARNAAA AALEMIHVYS LVHDDMPCMD DDALRRGKPT VHVQYDEPTA LLVGDALQSQ AFVALTDVDA LSPVQQAALV RELALASGSI GMAGGQAIDL ASVGLKLTRE QLEKMHRMKT GALLRAAVRM GALAGDTPSA ETLAALDVYA AAVGLAFQVV DDILDVTTDS ATLGKTAGKD AANDKPTYVS ILGLDASREL AAQLRAEAHD ALKPFGARAQ RLAELADLVV NRVS
|
| |