| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3764 |
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| Symbol | |
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| ID | 6180867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 733815 |
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| End bp | 734813 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641683534 |
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| Product | homoserine kinase |
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| Protein accession | YP_001810447 |
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| Protein GI | 172062796 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2334] Putative homoserine kinase type II (protein kinase fold) |
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| TIGRFAM ID | [TIGR00938] homoserine kinase, Neisseria type |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.208899 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.000313402 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGCCGTTT TCACCGCTGT TTCCGACTCC GATCTCGCGC AATGGATGCG CCACTACGAA
CTGGGCGACG TGCTGGCGTT CCGCGGCATT CCGTCCGGTA TCGAAAACAG CAACTTCTTC
CTGACGACGA CGCGCGGCGA GTACGTCCTG ACGATCTTCG AAAAGCTGAC GGCGGAACAG
CTGCCGTTCT ACCTCGACCT GATGCGCCAT CTGGCGAGCC ACGGCGTACC GGTGCCGGAT
CCGATCCCGC GCGACGACGG CGCGCTGTTC GGCCTGCTGC ACGGCAAGCC GGCCGCGATC
GTCACGAAGC TCGACGGCGC CGCCGAGCTC GCGCCGGGGA TCGAACACTG CATCGAGGTC
GGGCAGATGC TCGCGCGCCT GCACCTCGCG GGGCGCGACT ATGCGCGCTA CCAGCCGAAC
CTGCGCAGCC TGCCGTGGTG GCAGGAAAAC GTCCCGGCGA TCGTTCCGTT CGTTTCCGAC
GCGCAACGCG CGCTGCTCGA GGGCGAACTC GCGCACCAGG CCGCGTTCTT CGCGTCCGAC
GACTATGCGG CGCTGCCGAG CGGCCCATGC CACTGCGACC TGTTCCGCGA CAACGTGCTG
TTCGCGCACG CGGCGCCCGG CACCGGTCAT GACGTACGGC TCGGCGGCTT CTTCGATTTC
TATTTCGCGG GCTGCGACAA ATGGCTGTTC GACGTCGCGG TGACCGTCAA CGACTGGTGC
GTCGACCTCG CGACGGGCGT GCTCGACGTC GCGCGCGCGG ACGCGCTGCT GCGTGCGTAC
CAGACGGTCC GGCCGTTCAC GGCCGCGGAG CGCCGCCACT GGAGCGACAT GCTGCGCGCG
GGCGCGTACC GCTTCTGGGT GTCGCGCCTG TACGACTTCT ACCTGCCGCG CGCGGCCGAA
ATGCTCAAAC CGCACGACCC CGGTCATTTC GAACGCATCC TGCGTGAGCG TATCGCCCAC
ACGCCCGCGC TTCCCGAGAC CCATACCGCA TGCAACTGA
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| Protein sequence | MAVFTAVSDS DLAQWMRHYE LGDVLAFRGI PSGIENSNFF LTTTRGEYVL TIFEKLTAEQ
LPFYLDLMRH LASHGVPVPD PIPRDDGALF GLLHGKPAAI VTKLDGAAEL APGIEHCIEV
GQMLARLHLA GRDYARYQPN LRSLPWWQEN VPAIVPFVSD AQRALLEGEL AHQAAFFASD
DYAALPSGPC HCDLFRDNVL FAHAAPGTGH DVRLGGFFDF YFAGCDKWLF DVAVTVNDWC
VDLATGVLDV ARADALLRAY QTVRPFTAAE RRHWSDMLRA GAYRFWVSRL YDFYLPRAAE
MLKPHDPGHF ERILRERIAH TPALPETHTA CN
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