Gene BamMC406_3762 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3762 
Symbol 
ID6180865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp732385 
End bp732837 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content67% 
IMG OID641683532 
ProductMarR family transcriptional regulator 
Protein accessionYP_001810445 
Protein GI172062794 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.425599 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00135953 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGACCGCC TGCCCCCGCT GCCCCAGACG CTCGACGAGC AACTCTGCTT CGCCCTCTAC 
TCGACTTCGC ATGCGATGAC GAAGGCGTAC AAGCCGTTGC TCGACAAGCT GTCGCTGACC
TATCCCCAAT ATCTGGCCAT GCTCGTGCTG TGGGAACGCG ACGATATCGC GGTGAAGGAT
ATCGCCGCCC GCCTCGACCT CGACCCGGCC ACCGTCACGC CGCTGCTGAA GCGGCTCGAG
GCGCTCGGCT ACGTCGAGCG CGCGCGCAGC GCGACGGATG AGCGCGTCGT GAACGTGCGC
GTGACTGCCG AAGGCCGCGC GCTGAAGGTC AAGGCGCGCT CGGTGCCCGG CGATCTCTTT
TGCGCGATGC AGCAAACCCC CGAGTTTCTG GTCAGGCTGC GCGCGGATCT CCAGCAGCTG
CGCAACGCGC TGTCGGCCGC CAACGAAGGC TGA
 
Protein sequence
MDRLPPLPQT LDEQLCFALY STSHAMTKAY KPLLDKLSLT YPQYLAMLVL WERDDIAVKD 
IAARLDLDPA TVTPLLKRLE ALGYVERARS ATDERVVNVR VTAEGRALKV KARSVPGDLF
CAMQQTPEFL VRLRADLQQL RNALSAANEG