| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3754 |
|---|
| Symbol | |
|---|
| ID | 6180257 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | + |
|---|
| Start bp | 725927 |
|---|
| End bp | 726766 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641683524 |
|---|
| Product | ModE family transcriptional regulator |
|---|
| Protein accession | YP_001810437 |
|---|
| Protein GI | 172062786 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG2005] N-terminal domain of molybdenum-binding protein
[COG3585] Molybdopterin-binding protein |
|---|
| TIGRFAM ID | [TIGR00637] ModE molybdate transport repressor domain
[TIGR00638] molybdenum-pterin binding domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.305631 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.20307 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACA CGTCGCCTCC TTCCTCCTCC GCCGGACCGC TCGGACTGGG CGGCGAACTC
TGGCTGCGCG CCGGCCCGCA GACGCTCGGC GGCGCGACCC GCATCGCGCT GCTCGCGGCG
ATCGGCGAGA CCGGCTCGAT CACGCGCGCG GCGAAGGCCG TCGGCCTCAG CTACAAGGCC
GCGTGGGATG CGATCGATAC GATGAACAAC CTGGCCGGCG AGCCGCTCGT CACGCGTTCG
ACGGGCGGCA AGGGCGGCGG CGGCACGACG CTGACGCCGC GCGCGACCTC GCTGATCGCC
GCGTTCCGCA CGATCGAGCG CGAGCATCGC CGCTTCATCG ACGCGGCGAG CGCGGCGGTG
TCCGGCTTCG ACGTCGACTG GGCCCTGATC GGCCGGATCG GCATGAAGAC GAGCGCGCGC
AACCAGCTGT TCGGCAAGGT CGAGACGATC GTGCGCGGCA CGGTGAACGA CGAAGTGACG
CTCGTGCTGC CCGGCGGGCA GGTGATCGTC GCGGTGCTCA CGCACGAAAG CGCCGATGCG
CTCGGCCTGG CGCCGGGCGC GGATGCGTGC GCGCTCGTGA AGGCGTCGTG GGTCGTGCTG
GCGGTCGCCG ATGAAGCCGA AGCCACATTG AAGGTGTCCG CGCGCAACCA GTTGCACGGG
ACGGTCGAAA CCGTCGCGGC GGGCGCGGTG AACAGCGAGG TGACGCTGGC GCTCGACGGC
GGCGGCACGC TGACGGCCGT CATCACGAAC GACAGCGTCG GAGCGTTGCA ACTCGACGTC
GGCCGACGCG CGATCGCGCT GTTCAAGGCA TCGAGCGTGA TTCTCGCGGT GACGGGCTGA
|
|---|
| Protein sequence | MSDTSPPSSS AGPLGLGGEL WLRAGPQTLG GATRIALLAA IGETGSITRA AKAVGLSYKA
AWDAIDTMNN LAGEPLVTRS TGGKGGGGTT LTPRATSLIA AFRTIEREHR RFIDAASAAV
SGFDVDWALI GRIGMKTSAR NQLFGKVETI VRGTVNDEVT LVLPGGQVIV AVLTHESADA
LGLAPGADAC ALVKASWVVL AVADEAEATL KVSARNQLHG TVETVAAGAV NSEVTLALDG
GGTLTAVITN DSVGALQLDV GRRAIALFKA SSVILAVTG
|
|---|
| |