| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3751 |
|---|
| Symbol | |
|---|
| ID | 6179511 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | - |
|---|
| Start bp | 722763 |
|---|
| End bp | 723620 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641683521 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001810434 |
|---|
| Protein GI | 172062783 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.657019 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.20041 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTCC TCGACCTCGA TGCGGTACGC GCGTTCGTGC TGGTCGCCGA TCTCGCGAGC
TTCACGCGCG CCGCCGACGC GCTCGGCACC ACGCAGTCGG CCGTCAGCCT GAAGCTGAAG
CGGCTCGAAG CGCACCTCGG CAAGCCGCTG CTCGCGCGCA CGCCGCGCGT CGTCAAGCTG
GCGGCGGACG GCGAAAACTT CCTGCCGGCC GCCCGCGCGC TGCTCGACGC GCACGACCAC
GCGCTCGGCG CGATTTCGGC CGGCGTGCAC CGGCTGTCGC TCGGCGTCAG CGAACACGTC
GCGGTGCCCG ACCTGCCGGC CGTGCTGACG AGCCTGCACC GGCAAGATCC CGGGCTGTCG
CTGGAAATGC ATCTGGGGAC GTCGTCGAAC CTGCTCGCGC AATACGACGA ACGCCGGCTC
GACGCGGCGA TCGTGCGGCA CGAACCGGGC GAGGACCCAC CGCGCGACGA CGGCACGCTG
CTGTTTACCG AACCGCTCGC CTGGCTTGCC GCGCCCGACT GGGCGCCGCG CGCGGGTGAA
CCGCTGCCGC TCGCGGTGCT TGCCGGGCCG TGCGGCGTGC GAGCCGCCGC GCTGCGCGCG
CTGGAGCACG CGGGGCGGCC GTGGCGCGAG CGCTTCACGG GCGGCGGCGT CGCGGCGGTC
GCGGCCGCCG CCGCGGCCGG GCTCGCGGTC TGCCCGCTGG CCCGGCGCGT CGCGCCGCGC
ACGCTGGTCG ACGTCGGCGC GAAGTTCGGC TTGCCGCCGC TGCCGCACTC GCAGGTCGTG
TTGTATTCGC GCGTGCGCGA CACCCGCGCC GCCGCTGCTC TGCGGAGGTT TGCCGACAGT
CTCGCAATCT CGGCGTAA
|
|---|
| Protein sequence | MKVLDLDAVR AFVLVADLAS FTRAADALGT TQSAVSLKLK RLEAHLGKPL LARTPRVVKL
AADGENFLPA ARALLDAHDH ALGAISAGVH RLSLGVSEHV AVPDLPAVLT SLHRQDPGLS
LEMHLGTSSN LLAQYDERRL DAAIVRHEPG EDPPRDDGTL LFTEPLAWLA APDWAPRAGE
PLPLAVLAGP CGVRAAALRA LEHAGRPWRE RFTGGGVAAV AAAAAAGLAV CPLARRVAPR
TLVDVGAKFG LPPLPHSQVV LYSRVRDTRA AAALRRFADS LAISA
|
|---|
| |