Gene BamMC406_3750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3750 
Symbol 
ID6180081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp721800 
End bp722723 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content70% 
IMG OID641683520 
Producthypothetical protein 
Protein accessionYP_001810433 
Protein GI172062782 
COG category[R] General function prediction only 
COG ID[COG5006] Predicted permease, DMT superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0979614 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.188727 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCCCG AAGCCCGCAA GCACCTCCGC GCCAACCTGC TGATGCTCGG CGCCGCCGCG 
ATCTGGGGCT CGGCGTTCGT CGCGCAACGG CTGAGCCTCG ACGTGATCGG GCCGTTCCTG
TTCACGGGGC TGCGCTTCCT GCTCGGCGCT CTGGTGCTGA TCCCGCTGCT GACGTTCAAC
ACGGCGTCGC GCACGCAGCT GGCGGCGATC CGCCGCGAAC CGGCGCTGCT GGCGCCGGGG
CTCGCGCTCG GCGCGCTGCT CGCCGTATCG ATCTCGCTGC AGCAGTTCGG CCTGCAGTAC
ACGCGCATCG CCAACGCGGG CTTCATCAGC TCGCTGTACG TCGTGATCGT GCCGCTGATC
GGCGTGTTCG TCCGCCACCG GATCGGCGCC GGCACGTGGT TCGGCGCGCT GCTCGCGGCG
ATCGGCCTGT ATTTCCTCAG CATCGACGAG CATTTCTCGG TGCTCTACGG CGACTGGTTC
CAGCTCGCGG GCGCGGTCAT CATCGCCGCG CACGTGATGG CCGTCGGCCA TTTCGCGAAA
CGGCACGATC CGCTCGTGCT CGCCTTCCTG CAGTTCGTCA CGTGCGGCGT GGTGTGTCTT
GCGGCCGGCC TCGTGATCGA GCCGGTCAGC GTCGCGATGC TGCGCAGCGC GCTGCCGACG
CTACTGTACG GCGGGCTGCT GTCGGTGGGT GTCGGCTATA CGCTGCAGGT CGTCGCGCAG
CGCGACGCGG CGCCCGCGCA CGCGGCCGTG ATCTTCAGCA TGGAAGGCGT GTTCGCGGCG
ATCGCCGGCT GGGCCGCGCT CGGCGAGACG CTGACGCTGC GCGCGCTGGT CGGCTGCGCG
CTGATGCTGG CCGGCCTGCT CGCGTGCCAG TTGCTGCCGA ACGGCGACGC CCGGAAAAAG
GACGAGGACG CGCTGCCGGC ATGA
 
Protein sequence
MKPEARKHLR ANLLMLGAAA IWGSAFVAQR LSLDVIGPFL FTGLRFLLGA LVLIPLLTFN 
TASRTQLAAI RREPALLAPG LALGALLAVS ISLQQFGLQY TRIANAGFIS SLYVVIVPLI
GVFVRHRIGA GTWFGALLAA IGLYFLSIDE HFSVLYGDWF QLAGAVIIAA HVMAVGHFAK
RHDPLVLAFL QFVTCGVVCL AAGLVIEPVS VAMLRSALPT LLYGGLLSVG VGYTLQVVAQ
RDAAPAHAAV IFSMEGVFAA IAGWAALGET LTLRALVGCA LMLAGLLACQ LLPNGDARKK
DEDALPA