| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3746 |
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| Symbol | |
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| ID | 6180682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 717207 |
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| End bp | 718850 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641683516 |
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| Product | glycoside hydrolase family 13 protein |
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| Protein accession | YP_001810429 |
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| Protein GI | 172062778 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.260417 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.176524 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGATT GTTCGCACGA TCCGTATGCG CAGCACTACA TTCACTGCCT GCCGTTCGGC
GCGCAGCCCT GCGGCGCGCT CGGCAAGTCG CCGCGCACGC ATTTCCGCGT GTGGGCGCCG
GCCAGCATGC ACGTTCAGCT CGAACTCGAT ACCGGTAATG GCACGACGCT CGTTCCGATG
ACGGCCGCCG GTCGGAACTG GTTCGAAGCG TTCGTCGAAT GCGGTGCGGG CGCGCGTTAC
CGTTATCGGC TCGACGATGT CGTGTCGATT CCCGATCCCG CGTCGCGTTC GCAGCCCGAC
GGGCTCAACG GCCCGAGCGA GGTCATCGAT CCGCGCGCGT TCACGTGGCG CAACACGTTC
TGGCGCGGAC GTCCGTGGGA AGACATCGCG CTGTATGCGA TTCGTCCGCA CGCGGTGGGC
GGCTTCGACG GCGTGCGCCG CCGGCTGCCG CAGCTCGCGC GTCTCGGCGT GACCGCGCTG
GAGTTGCTCG CGTCGCCGCA CGACAGCCTG CCGTTCGCGC CGCTCGCGGC CGAGGGCGGC
CCCGATGCAC TGAAGGCGCT GATCGACGAC GCGCACGGCT ACGGTCTCGC GGTGCTGCTG
GAGCTCGATT ACGCGCGCTT CGGCAGCGGC ACCGACGCGC TGCGCCACTA CGCGGTACCG
TTCTTCCATA CGCGCGACGA TCCGCTGCAG GCGCCGCCGC TCGCGCTCGA TCATCCGGAA
GTCTGCGACT TCTTCTGCGA CAACGCGATG TACTGGATCG ACGAATACCG TTGCGACGGG
CTGCGGCTGC GCGAGGCCGA CCGGATCGGC ACGTCGTGGC TGCGCGAGAT CGCCGACCGC
GTGCGCGCGG CCGTGCCGGC CGACCGGCTG ATCCACCTCG TGCTCGGCAG CGAGCGTCAT
CCGGTGCATC TGGCCGATAC CCATTTCGAT GCCCAGTGGA ACGGTTGCGG CGAACGCGCG
CTGCGTCGGT TGACGGACCG CGGCACGGCC GCTCACGAAG GGATTTCGGC ACACCAGTCG
ATCCATACGC TGGCCCGTGC ATTGACCGCG GCCGGCGCGG CGTTCCAGCC GGCCGCCTCC
GGCGACGGCC CCTGCGCCGA AGGGCTGGCG TTGACCTCGC TGGTGCTGTC CGACGGCGTA
TGGTGCGAGA GCGAGCATGG CGAGCTCGAG ACGCCGGGGC TCGCCGCCCT CGCGCTGTCG
CTGCTGACGC CGCAGATCCC GCTGATCTTC GACGAAACCG CGCGCGATGC CGATCGAGCG
CATTTCGTGC AGTCGGCGCT CGCCGTGCGC GCGAAGCTGA TCGCGCCGCG GCTGGCCGAT
TGCCGGCCGC GGGACGCGCA CACGTTGAAG GCGGGTGGTG ATGGCGATGC CGATGCGCTG
GTGGCGTCGT GGCAGCTCGC CGACGACGAG ACGCTGACCA TCGCACTGAA CCTGTCGCCC
GACGCGCTGC CGTTCGATGC GCCGAGAGGG CAGATCGTGT TCGAGACGCC GGCGCGCGCA
CGCGACCGGA TCGACGAGGG CGATTTGCCG CCGTATTCGC TCGTCGCGTG GCTGACGGGG
GACGTCAACC ACTACGCGCT CACGCACGAC GTGCGCCGGC TCGACGACAG CACGTGGCGC
GGCATGCGCG CCGATCTGAA CTGA
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| Protein sequence | MSDCSHDPYA QHYIHCLPFG AQPCGALGKS PRTHFRVWAP ASMHVQLELD TGNGTTLVPM
TAAGRNWFEA FVECGAGARY RYRLDDVVSI PDPASRSQPD GLNGPSEVID PRAFTWRNTF
WRGRPWEDIA LYAIRPHAVG GFDGVRRRLP QLARLGVTAL ELLASPHDSL PFAPLAAEGG
PDALKALIDD AHGYGLAVLL ELDYARFGSG TDALRHYAVP FFHTRDDPLQ APPLALDHPE
VCDFFCDNAM YWIDEYRCDG LRLREADRIG TSWLREIADR VRAAVPADRL IHLVLGSERH
PVHLADTHFD AQWNGCGERA LRRLTDRGTA AHEGISAHQS IHTLARALTA AGAAFQPAAS
GDGPCAEGLA LTSLVLSDGV WCESEHGELE TPGLAALALS LLTPQIPLIF DETARDADRA
HFVQSALAVR AKLIAPRLAD CRPRDAHTLK AGGDGDADAL VASWQLADDE TLTIALNLSP
DALPFDAPRG QIVFETPARA RDRIDEGDLP PYSLVAWLTG DVNHYALTHD VRRLDDSTWR
GMRADLN
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