| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3737 |
|---|
| Symbol | |
|---|
| ID | 6181491 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | + |
|---|
| Start bp | 707869 |
|---|
| End bp | 708792 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641683507 |
|---|
| Product | metal-dependent hydrolase-like protein |
|---|
| Protein accession | YP_001810420 |
|---|
| Protein GI | 172062769 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3687] Predicted metal-dependent hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.356192 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTCAG CCGCTTCCGC CACCGCAGCC GAGGTGATGC CGGTGCGCCG CGACCTGCGC
TTCGACCTGC CGGTCGAACG CGCGAAGGAC TGGCACGGGC TCGGCCCGCA CGTGACGCAC
TTCTTCAATG CGCTGTCGCT GCTGTTTCCG GCCGGCGAAC GTTTTTTCAT GGATTCGGTG
CGCAACTATC GCGACCGGAT CGACGATCCC GTGCTGAAGC GCCAGGTGCT CGGTTTCATT
GGCCAGGAGG CGATGCATAC GCGCGAGCAC GTCGAATACA ACGAGCTGAT GCAGGCGAAC
CGGCTGCCCG CGCGCAAGCT CGACAAGCGC GTATGGACGG TGCTCGGCTT CGCGAAGCGC
GTGCTGCCGC ATTCGGTTCA GCTCGCGCAT ACGGTCGCGG CGGAGCACTA CACGGCGATG
CTCGCGGACT GGATCCTGCG CGACCCGACG CGTCTCGCCG GCTCGGCCGA AGGCTACCGG
CAGATGTGGG TATGGCATGC GCTGGAGGAA ACCGAGCACA AGGCGGTGTC CTACGACGTG
TGGAATGCCG TGATGAAGCC GGGCCTGCGC CGCTACCTGA TCCGCGTCGG CGTGTACCTG
CTGACGACGC TGACGTTCTG GCCGACCGTG TTTCTGATCC ACGTGACGCT GTTGTCGCGC
GATCGCGATA TCAGGCATCG CGTGCGCGGC ATGCTGCGGA TGATCGCGTT CCTGTACGGG
CCGCGCCGCG GGCTGTTTCC TCGCATCGCG GGGGAGTGGC TGAGCTTTTT GCGGCCCGGC
TTCCATCCGT GGGATCACGA CAACCGCCAT CACCTTTCCC GCGTCGACGG GCTCGTCGCC
GCGTACGGCG AACACGATGA CGCGGCGGCC GGCCGCGGTC GCTCCCACGC CCACGCGCCC
GCACCGGTCG CATCGGGACG CTGA
|
|---|
| Protein sequence | MKSAASATAA EVMPVRRDLR FDLPVERAKD WHGLGPHVTH FFNALSLLFP AGERFFMDSV
RNYRDRIDDP VLKRQVLGFI GQEAMHTREH VEYNELMQAN RLPARKLDKR VWTVLGFAKR
VLPHSVQLAH TVAAEHYTAM LADWILRDPT RLAGSAEGYR QMWVWHALEE TEHKAVSYDV
WNAVMKPGLR RYLIRVGVYL LTTLTFWPTV FLIHVTLLSR DRDIRHRVRG MLRMIAFLYG
PRRGLFPRIA GEWLSFLRPG FHPWDHDNRH HLSRVDGLVA AYGEHDDAAA GRGRSHAHAP
APVASGR
|
|---|
| |