| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3734 |
|---|
| Symbol | |
|---|
| ID | 6181470 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | + |
|---|
| Start bp | 705231 |
|---|
| End bp | 705701 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641683504 |
|---|
| Product | HxlR family transcriptional regulator |
|---|
| Protein accession | YP_001810417 |
|---|
| Protein GI | 172062766 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1733] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.847135 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.540856 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAGGC AGAGAAGTCT TGCGGATTCG CCGTGCCCGG TGGCGCGGGC GACCGATATC
GTCGGCGATC GCTGGGCGTT GCTGATCGTG CGCGACGCGT TCGACGGCGT GCGCCGGTTC
GGCGATTTCC GCGCGAGCCT CGGCGTCGCG AGCAACATCC TGTCCGACCG GCTCAGGATG
CTGGTGGAGG CCGGCGTGTT CGACGTCGTG CCCGCGTCGG ACGGCAGCGC GTATCAGGAG
TACGCGTTGA CGAAGAAGGG CGAGGGGCTG TTTCCGGTGA TCGTGATGCT GCGGCAGTGG
GGCGAGGCGA ACCTGTTCGC GCGCGGCGAG CCGCATTCGG TGCTGGTCGA GCGCAGGACG
GGCCGCGCGA TCCGCAAGCT CGCGCTGCGG CACGACGACG GCCGGCCGCT GAAGGCGGCG
GAGACGGTCG TGCGAAAGGT GGGCGACGAC GAGGGCGCGA CGCGGGGGTG A
|
|---|
| Protein sequence | MARQRSLADS PCPVARATDI VGDRWALLIV RDAFDGVRRF GDFRASLGVA SNILSDRLRM
LVEAGVFDVV PASDGSAYQE YALTKKGEGL FPVIVMLRQW GEANLFARGE PHSVLVERRT
GRAIRKLALR HDDGRPLKAA ETVVRKVGDD EGATRG
|
|---|
| |