Gene BamMC406_3727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3727 
Symbol 
ID6180458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp695203 
End bp697428 
Gene Length2226 bp 
Protein Length741 aa 
Translation table11 
GC content68% 
IMG OID641683497 
Productexopolysaccharide tyrosine-protein kinase 
Protein accessionYP_001810410 
Protein GI172062759 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis 
TIGRFAM ID[TIGR01005] exopolysaccharide transport protein family
[TIGR01007] capsular exopolysaccharide family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.601241 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGAACA CGCAAGCAAA ACACACCTAC GCGGGTCCGG CCGCGAAAAC CGAGGAAGAG 
GACGTCGTCC TCGGCCAGTT GCTCCAGGTG ATCATGGACG ACATCTGGCT GCTGCTCGGC
ATCGCGGTGA CCGTCATCGC GCTCGCCGGC CTGTACTGCT TCGTCGCGAA GCCGGTCTAT
CAGGCCGACG TGCACGTGCG GGTCGAGGGC AACGACAATA CGTCGCAGGC GCTCACGCAG
ACGCAGACGG GTGCATCGAT CAACAGCGGT CCGCAGCAGG CGCCGACCGA TGCGGAAATC
GAGATCATCA AGAGCCGCGG CGTCGTCGCG CCGGTCGTCG AGGAGTTCAA GCTGAACTTC
TCGGTCGTGC CGAAGACGAT GCCGCTGATC GGCAGCCTGG CCGCGCGCAT CGCGACGCCG
GGCGAGCCGT CGCGCGCGTG GTTCGGCCTG CGGTCGTACG CGTGGGGCGG CGAAGTCGCC
GATATCGACT CGATCAACGT CGTGCCCGAG CTCGAAGGCA AGAAGATGAC GCTGACGGCC
GGCCCGAACG GCACCTACAC GGTCGTCGAC CAGAACGGCC GCCGCCTGCT GTCGGGCCGC
GTCGGCGAAT CGGAGCAGGG CGGCGGCGTC ACGCTGCTCG TGCAGAAGCT CGTCGCGCGT
CCGGGCACGC AGTTCACGGT GGTCCGCTAC AACGATCTCG ACGCGATCAC CGGCTTCCAG
TCGGGCATCC AGGTGAGCGA GCAGGGCAAG CAGACGGGCG TCGTGCAGAT CTCGCTCGAA
GGCAAGAATC CGGACCAGAC GGCCGCGATC GCGAATGCGC TCGCGCGGTC GTACCTGAAC
CAGCACGTGA TCGCGAAGCA GGCCGAAGCG ACCAAGATGC TCGACTTCCT GAAGGGCGAG
GAACCGCGCC TGAAGGCCGA CCTCGAGCGT GCGGAAGCCG CGCTGACGCA GTATCAGCGC
ACGTCCGGCT CGATCAACGC GAGCGACGAG GCGAAGGTCT ACCTGCAGGG CAGCGTGCAG
TACGAGCAGC AGATCGCCGC GCAGCGCCTG CAGCTCGCGT CGCTCGCGCA GCGCTTCACC
GACTCGCACC CGATGGTGAT CGCCGCGAAG CAGCAGCTCG CGGAGCTGCA GGGCGAGAAG
GACAAGTTCA GCAACCGGTT CCGCAGCCTG CCGGCGACCG AAGTGAAGGC CGTCCAGCTC
CAGCGCGACG CGAAGGTCGC CGAGGACATC TACGTGCTGC TGCTGAACCG CGTGCAGGAA
CTGTCGGTGC AGAAGGCCGG CACGGGCGGC AACATCCACC TCATCGACTC GGCGTTGCGC
CCGGGCGACC CGATCAAGCC GAAGAAGGTG CTGATCCTGT CGGCCGCGGT GTTCCTGGGG
CTGATCCTCG GCACCGGCGT CGTGTTCCTG CGCCGCAACC TGTTCCAGGG CATCGAGGAT
CCGGACCGTG TCGAGCGCAC GTTCAACCTG CCGCTGTACG GGCTGGTGCC GCAAAGCGCC
GAGCAGGTGA AGCTCGACGC GATGGCCGAG AAGGGCGGCG GCCGTGCGCG GCCGATCCTC
GCGAGCCTGC GCCCGAAGGA CCTGAGCGTC GAAAGCATGC GCAGCCTGCG CACCGCGATG
CAGTTCGCGA TGATGGACGC GAAGAACCGC GTGATCGTGC TGACCGGCCC GACGCCGGGG
ATCGGCAAGA GCTTCCTGAC GGTCAATCTC GCGGTGCTGC TCGCGCATTC GGGCAAGCGC
GTGCTGCTGA TCGACGCCGA CATGCGCCGC GGGATGCTCG ACCGCTACTT CGGCCTCACC
GCGCAGCCGG GCCTGTCCGA GCTGCTGAGC GACCAGTCGG CGCTCGAGGA CGCGATCCGC
GAGACGCCGG TGCAGGGCCT GTCGTTCATC TCGGCCGGCA CGCGCCCGCC GAACCCGTCG
GAGCTGCTGA TGTCGACGCG TCTGCCGCAA TACCTCGAAG GGCTCGGCAA GCGCTACGAC
ATCGTGTTGA TCGACTCGCC GCCGGTGCTG GCGGTGACCG ACGCGACCAT CATCGGCCGC
ATGGCCGGCG CGACCTTCCT GGTGCTGCGC TCGGGCATGC ATACCGAAGG CGAGATCGCC
GACGCGATCA AGCGCCTGCG CACCGCGGGC GTCGATCTGG AAGGCGGGAT CTTCAACGGC
GTGCCGCCGA AGGCGCGCGG CTACGGCCGC GGCTATGCGG CCGTCCACGA ATACCTGAGC
GCCTGA
 
Protein sequence
MVNTQAKHTY AGPAAKTEEE DVVLGQLLQV IMDDIWLLLG IAVTVIALAG LYCFVAKPVY 
QADVHVRVEG NDNTSQALTQ TQTGASINSG PQQAPTDAEI EIIKSRGVVA PVVEEFKLNF
SVVPKTMPLI GSLAARIATP GEPSRAWFGL RSYAWGGEVA DIDSINVVPE LEGKKMTLTA
GPNGTYTVVD QNGRRLLSGR VGESEQGGGV TLLVQKLVAR PGTQFTVVRY NDLDAITGFQ
SGIQVSEQGK QTGVVQISLE GKNPDQTAAI ANALARSYLN QHVIAKQAEA TKMLDFLKGE
EPRLKADLER AEAALTQYQR TSGSINASDE AKVYLQGSVQ YEQQIAAQRL QLASLAQRFT
DSHPMVIAAK QQLAELQGEK DKFSNRFRSL PATEVKAVQL QRDAKVAEDI YVLLLNRVQE
LSVQKAGTGG NIHLIDSALR PGDPIKPKKV LILSAAVFLG LILGTGVVFL RRNLFQGIED
PDRVERTFNL PLYGLVPQSA EQVKLDAMAE KGGGRARPIL ASLRPKDLSV ESMRSLRTAM
QFAMMDAKNR VIVLTGPTPG IGKSFLTVNL AVLLAHSGKR VLLIDADMRR GMLDRYFGLT
AQPGLSELLS DQSALEDAIR ETPVQGLSFI SAGTRPPNPS ELLMSTRLPQ YLEGLGKRYD
IVLIDSPPVL AVTDATIIGR MAGATFLVLR SGMHTEGEIA DAIKRLRTAG VDLEGGIFNG
VPPKARGYGR GYAAVHEYLS A