Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3725 |
Symbol | |
ID | 6180456 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 693537 |
End bp | 693980 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641683495 |
Product | protein tyrosine phosphatase |
Protein accession | YP_001810408 |
Protein GI | 172062757 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0394] Protein-tyrosine-phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.353108 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCCGCA ACATCCTGAT CGTCTGTCAC GCGAACGTCT GCCGCAGCCC GGCAGCCGAA ATGCTGTTCA AGTCGCACAC CGCGTCGCGC GGCGGCCCGC GCGTGACGTT CCATTCCGCG GGGGTGCGCG CGAACGACGG CGACGGCATC GATCCGGTGA TGCGGCAACT GCTCGCCGAG CGCGGCGTCG ATGCGACGAC GCACCGGTCG CGTCGGCTGT CGCGCCGGCT CGTGCGCGAC GCCGACCTGA TTCTCGTCAG CGAGCGCGGA CAGATCGCGG CCGTCGAATC GGTCGATCCG TTCGCGCGCG GCAAGGTTCA CCTGCTTGGC AAGTGGGAGG ACGCCGAGAT CGCGGATCCG CATGGCGGCC CCGAGGCCGA CTATCGCGAG AGCTACTCAT TGATCGAACG TCTGGTTCAA GGATGGCTGC AAAAACTATG CTGA
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Protein sequence | MFRNILIVCH ANVCRSPAAE MLFKSHTASR GGPRVTFHSA GVRANDGDGI DPVMRQLLAE RGVDATTHRS RRLSRRLVRD ADLILVSERG QIAAVESVDP FARGKVHLLG KWEDAEIADP HGGPEADYRE SYSLIERLVQ GWLQKLC
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