| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3720 |
|---|
| Symbol | |
|---|
| ID | 6180141 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | + |
|---|
| Start bp | 686337 |
|---|
| End bp | 686918 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641683490 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001810403 |
|---|
| Protein GI | 172062752 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.919672 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.247507 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCTGA CCCGCGACTC GCTGCTCACG CTCGAAGCGT ACGCGAAGAT CCGCAAGGCC
GAACACGCGC GGCTCGTTGC GTACAAGCGT CGCCGTGCGG TGGCGCTCGG CAACCATCTG
CGCTTGCTGT TCGAGGACGA GACCACGATC CGCTATCAGA TCCAGGAGAT GCTGCACATC
GAGAAGATCT TCGACGAGGC GGGTATCGAA GGCGAGCTGG AAGCCTACCT GCCGCTCGTG
CCCGACGGCA CCAACCTGAA GGCGACGCTG CAGATCGAAT ACGAGCACGA GGCCGAACGG
CGGGCGGCGC TCGCGCGGCT GATCGGCGTC GAGGATCGCG TGTACCTGCA GGTCGACGGG
CATCCCGCCG TGTATGCGAT CGCCGACGAG GATCTCGATC GCGACAACGC GGAGAAGACG
TCCGCCGTTC ATTTCGTGCG CTTCGAATTG AGCGCGCCGA TGCGCGCGGC GCTCAAGGAC
GGCGCGACGC TGTCGATCGG CTGCGACCAC CCGGCCTATA CGTTGCCGCC GCAACCAGTG
GACGCGGACG TGGCCGCGTC GCTGGCCGGC GATCTGAGCT GA
|
|---|
| Protein sequence | MTLTRDSLLT LEAYAKIRKA EHARLVAYKR RRAVALGNHL RLLFEDETTI RYQIQEMLHI
EKIFDEAGIE GELEAYLPLV PDGTNLKATL QIEYEHEAER RAALARLIGV EDRVYLQVDG
HPAVYAIADE DLDRDNAEKT SAVHFVRFEL SAPMRAALKD GATLSIGCDH PAYTLPPQPV
DADVAASLAG DLS
|
|---|
| |