| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3716 |
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| Symbol | |
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| ID | 6179605 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 679363 |
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| End bp | 681144 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641683486 |
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| Product | polypeptide-transport-associated domain-containing protein |
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| Protein accession | YP_001810399 |
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| Protein GI | 172062748 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2831] Hemolysin activation/secretion protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.6234 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATCGCG AGATTGGCGA AATTCGAGTG TTAAGGATAA TTAACAAAAG CGGTGGCGAT
CGAACTCGGG TCGCCGATGT ACGGCGCGTA GCCGCATTTC CCGGTCGTGC GCTGTGTGCC
GCGAGTCTGC TGGCGTTCGC TGTTGGCGCG GCGGCGCAGA CGCACGAGTC CGGCGCGCAG
CCGCTGAGTG CGCAGCGCCA CCAGGCGCAA CAGCTCGACG AGCTCAGGCA GCAGATGCTC
GACCGGCCGG ACGTGCTGTC GGCGAAGCCG ACGAACGAAT CCGATACGCT GCGGTTCCCG
GCAGAAACGC CGTGTTTCGA TATTCACGCG ATCGAGTGGC GAGGCACCGA TGCCTTCCCG
TGGCTGCGTG ACGCAGTCCC GATCGACCGC GCGTGCATCG GTCGGAACGG GTTGAGTCTG
CTGCGCGAAT GGGTCGGACG GCGTCTCATC GCGCGCGGTT ACATCACGTC GCTCGTCAGC
ATTCCGCCGC AGAACTTGTC GACCGGACGC CTGATCATCG AGGTGCTGCC GGGCCGCATT
GGCGCGATCG ACGATACGCG CGGTCGGATC GGGTGGACGC CCATCGTGTT TCCGCGCGGC
GGGCATGTAC TGCTGAACGT GCGCGATCTC GATCAGGCGC TCGAGAACGT GCGACGCCTT
CCCGGCCAGG CGGCCACCGC GTTCGATCTG GTTCCGGGCG CGTCGCTGGG CGACACCGAC
ATCGTTATCC GGCATCCCGA CGATGCGCGT CGCGTTCGTT TCGTCGCGAC GGCCGACAAC
GGCGGGCTGG ATGCGACCGG CCGCAACCAG CTTGGCGCGA TCGTCTCGAT CGATTCGCCG
CTGCGGCTCT ACGATCAACT GATCGTCACC TACAACACCG ACGCCGCGCT GCGCAACAAG
TCGCTCGGCT CGCAGGCAAA AAGCGCCGCA TGGAACGTGC CGATCGGCTA TGCGTCGTTT
GCGCTCGGCA TCAGCGAGTG GTCGAGCCGG CAGACGCTGG TGGCCGACTT ACCCGGTGTG
GTCGTGCCGC CGCTCGGTCA GCGGACCCGT CGCTACGAAG CCGGCATCGG CTACGTGCCG
TATCGCTCCG GTCACGGCAA GACCACGCTG CGCTTCAAGG TCGCCCGCCG CGAGGACCGG
TCGTGGTTCG GGCCGATCCA GCTCGATGTG TTCCGTCATG ACATCGTCAG CTACGAAGTG
AGCGCGGCGC ATCGCGAGAA GTTCGCGCGC GCAACCGTCG ACGCCAGCGT TGGCATGCGC
TCGAGCCTCG CCGGTCTGAG CGCCTTCCCG GGGCGCGTCA ACGGACAGAC CACATGGGAC
GGCCGCTATC GCGTGTACAC CGCGACACTT GGCGCCGACG CGCCGTTCCG GATCGGCGCG
CGGCCATTCG GCTATCGCGG ATTCCTCCAG TTCCAGTACG CGCCCGGCGC GCTGCCGTCG
ACCGAGTACC TGCAGATCGG CGGCCGCTAC ACGGTGCGCG GCTTCGACGG TAACCAGACG
CTCGCCGGCG ATAGCGGCTG GTTCTGGCGC AACGAGCTGG CCACGCCGTG GTTCGGCGCG
CACGAGGCCT ATGTTGCGCT CGACGCTGGC CTGGTCACGG GTGCGGGCTC GCGCGAAGGC
GCGGGCCGGG AAGGGCGCAC GCTGATCGGC GCCGCGCTCG GCGTGCGCGG CAGCTACCGG
ATGCTCGGCT ACGACGTCGC GCTCGGCATG CCGCTTCGCA AGCCCGGGGC GCTGCGAACC
GCGCAACCCA CGTTCGATGT GTTGCTCACG AGCCGTTTCT GA
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| Protein sequence | MYREIGEIRV LRIINKSGGD RTRVADVRRV AAFPGRALCA ASLLAFAVGA AAQTHESGAQ
PLSAQRHQAQ QLDELRQQML DRPDVLSAKP TNESDTLRFP AETPCFDIHA IEWRGTDAFP
WLRDAVPIDR ACIGRNGLSL LREWVGRRLI ARGYITSLVS IPPQNLSTGR LIIEVLPGRI
GAIDDTRGRI GWTPIVFPRG GHVLLNVRDL DQALENVRRL PGQAATAFDL VPGASLGDTD
IVIRHPDDAR RVRFVATADN GGLDATGRNQ LGAIVSIDSP LRLYDQLIVT YNTDAALRNK
SLGSQAKSAA WNVPIGYASF ALGISEWSSR QTLVADLPGV VVPPLGQRTR RYEAGIGYVP
YRSGHGKTTL RFKVARREDR SWFGPIQLDV FRHDIVSYEV SAAHREKFAR ATVDASVGMR
SSLAGLSAFP GRVNGQTTWD GRYRVYTATL GADAPFRIGA RPFGYRGFLQ FQYAPGALPS
TEYLQIGGRY TVRGFDGNQT LAGDSGWFWR NELATPWFGA HEAYVALDAG LVTGAGSREG
AGREGRTLIG AALGVRGSYR MLGYDVALGM PLRKPGALRT AQPTFDVLLT SRF
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