| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3711 |
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| Symbol | |
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| ID | 6179454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 674408 |
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| End bp | 676210 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641683481 |
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| Product | endonuclease/exonuclease/phosphatase |
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| Protein accession | YP_001810394 |
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| Protein GI | 172062743 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2374] Predicted extracellular nuclease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.187879 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.194712 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACTCC TGCCGTCACC ACTCGCGCTT GCCGCTTTTC TCGTGCTGTC CGTTCCGCCC
GCCACCGCCG CGCTGCCGGT CAGCGCGGTC TGCGGCGGCG CCACCACCGC GATCGCCGAC
ATCCGGCATC CCGCGGGCCG CTCCCCCCTG GCCGGACACA CCACGTCGAT CGAAGCAATC
GTCACCGCGG CGTTCGGCGG CCCCGATGGC TTCGGCGGAT TCTTCGTCCA GCAGTCGGAC
GCGCAGCGGC GACACCGGCC GGGCGTGCCG GAAGGCCTGT TCGTATATGC GCCGCATGCG
CATGTGCAGC CGGGCGAGCG CGTGCACATT ACCGGCAGGA TCGAACAGAA ATACGGCCGG
ACGCAACTCA CGTTGGCGGG CCGCGTGGCC GTCTGCGCGC GCGGGCAGAG CGTCATGCCG
GCCGCGCTGA TGCTGCCGGT CGACAGCGAA TCCGTATTCG CCGCGCATGA AGGCATGCGG
GTGCGTTTCC CGCAAACGCT GACGGTCAGC GATACTTACG AACTCGGACG CTACGGCAGC
ATCGTGCTCA GCCACGGCCA GCTGTACATA CCGACGCACG TGGTGCCGCC GGCCGAAGCC
GCTGCGCAGG CGGCGGCCAA TGCACGCAAC CGCATCGTGC TCGACGACGG TTCGAGCCGC
GTGAACCCTG CAACCGCCCG CTATCCGCCG CCTGCGCTCA GCGCCGCCAA CACGCTGCGC
GCGGGCTACA CGGTGCGCGG CATCGAAGGC GTGCTCGAGC GGCGCTTCGG CACGTGGCGA
TTGCAGCCCG TATCGTCCTC GCCACCCACC TTCGATGCCG CGTCGAATCC GCGTGCCGAT
GCACCGGCAC GGCATCCGCA AGCCGACGTG CGGGTCGCGT CGTTCAACGT ATTCAACTAC
TTCAACGGCG ACGGCGCGGG CGGCGGCTTC GGCGATCCGT CCGGCCGCGG CGCGAAGACG
CCCGCCGCCT TCGCGCGGCA GGAAGCCAAG ATCGTGGCCG CGCTGCGTGC GCTGCGCGCC
GACGTGATCG GCCTGATGGA AATCGCGAAC AACGGTCAGG GCCCTGCGAG CGCCGTGCAG
CGGCTCGCGG CCCGGCTCGG CGGCGGCTGG CGCGCGGTCG ATCCCGGCAC CCCACGGCTC
GGGCGCGATG CGATCGCGGT CGCGCTGCTG TATGACAGCC GGACGATCGA GCCCGTCGGG
CGCGCCGCGA CCGTTGCGCT CGACGGCCGG AATCGCCCGC CGCTCGCTCA GACGTTCCGT
CGCGTCGGCG GCACCCGCGC GTTCACGGTC GCGGTCAATC ACCTGAAGTC GAAGAACTGC
CCGCACGCCG CCGGCCCGGA TCTCGACCAG TCGGACGGCC AGGGCTGCTG GAACGCGACG
CGCACACGCG CGGCCGAACG CGTCGCCGCG TGGCTTGCGA CGTCGCCGAC CGGCGCCGCG
GCCGACGGCG TGCTGCTGAT CGGCGATCTG AACAGCTACG CGAAGGAAGA TCCGCTGCGC
GCGCTCGAAT CTCGCGGTTA CGCCAACCTC GTCGCCCGCT TCGCCGGCAA TGCCGGCTAC
ACGTATGTAT TCCGCGGCGA AGCCGGCAAC CTCGACCACG CACTCGCGAC GCCGCCGCTC
GCCGCCCGCG TGAAAGCCGT GCATGCCTGG CACATCAACG CCGATGAACC GATTGCACTG
CAAGCCGTAC CCGATTACAA AACCCCGGCG CAACAGGCCG CCTATTACGC GCCCGATGCA
TACCGTTCGT CGGATCACGA TCCCGTCGTG ATCGACCTTG CGCTGGAGGA AGGCGCCACC
TGA
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| Protein sequence | MSLLPSPLAL AAFLVLSVPP ATAALPVSAV CGGATTAIAD IRHPAGRSPL AGHTTSIEAI
VTAAFGGPDG FGGFFVQQSD AQRRHRPGVP EGLFVYAPHA HVQPGERVHI TGRIEQKYGR
TQLTLAGRVA VCARGQSVMP AALMLPVDSE SVFAAHEGMR VRFPQTLTVS DTYELGRYGS
IVLSHGQLYI PTHVVPPAEA AAQAAANARN RIVLDDGSSR VNPATARYPP PALSAANTLR
AGYTVRGIEG VLERRFGTWR LQPVSSSPPT FDAASNPRAD APARHPQADV RVASFNVFNY
FNGDGAGGGF GDPSGRGAKT PAAFARQEAK IVAALRALRA DVIGLMEIAN NGQGPASAVQ
RLAARLGGGW RAVDPGTPRL GRDAIAVALL YDSRTIEPVG RAATVALDGR NRPPLAQTFR
RVGGTRAFTV AVNHLKSKNC PHAAGPDLDQ SDGQGCWNAT RTRAAERVAA WLATSPTGAA
ADGVLLIGDL NSYAKEDPLR ALESRGYANL VARFAGNAGY TYVFRGEAGN LDHALATPPL
AARVKAVHAW HINADEPIAL QAVPDYKTPA QQAAYYAPDA YRSSDHDPVV IDLALEEGAT
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