Gene BamMC406_3696 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3696 
SymbolwecC 
ID6179236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp658505 
End bp659761 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content64% 
IMG OID641683466 
ProductUDP-N-acetyl-D-mannosamine dehydrogenase 
Protein accessionYP_001810379 
Protein GI172062728 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0677] UDP-N-acetyl-D-mannosaminuronate dehydrogenase 
TIGRFAM ID[TIGR03026] nucleotide sugar dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.250538 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTTCG ATGTCATTTC CGTAATCGGC CTCGGCTACA TCGGCTTGCC GACTGCCGCC 
GCATTTGCGG CGCGACGTAA ATCGGTGGTC GGCGTCGACG TCAACCGCGC GACGGTCGAC
ACGATCAATC GCGGCGAGGT GCATATCGTC GAGCCGGAGC TCGACATGCT CGTGCGCGCG
GCGGTGACGC AAGGACACCT GCGGGCGACC GATACGGTCG AGCCGGCCGA TGCCTTCCTG
ATCGCGGTGC CGACGCCGTT CGCCGCAGGA CACAAGCCGG ATCTGACTTA TGTCGAAGCG
GCAAGCCGCG CGATCGGACC GGTTCTGAAG AAGGGCGATC TCATCGTGCT GGAATCGACG
TCCCCGGTCG GCACGACGGA GAAGATCGCC GCATGGCTGG CCGCGATGCG GCCCGATCTG
ACGTTCCCAC AGCAGGCCGG CGAGCAGTCG GATATCCGGA TAGCCCACTG CCCGGAGCGC
GTCCTGCCGG GGCACGTGAT CCGCGAACTG GTGGAAAACG ATCGTGTGAT CGGCGGCATG
ACCCGCCGGT GCAGTGAGCT GGCCGCCGAG CTGTATCGGG TCTTCGTGCG CGGCGAGTGC
GTATTGACCG ACGCGCGGAC AGCGGAGATG TGCAAGCTGA CCGAGAACTC GTTCCGCGAC
GTCAATATCG CGTTCGCCAA TGAACTGTCG GTCATCTGCG AGTCGCTCGA TATCAACGTG
TGGGAACTGA TTCGGCTGTC GAACCGGCAT CCGCGCGTCG ACATCCTGCA ACCGGGCCCC
GGCGTGGGCG GACACTGCAT CGCCGTGGAT CCGTGGTTCA TCGTCGACTC CGCGCCCGAG
CACGCGCGCC TGATCCGCAC CGCGCGTACC GTCAACGACG ACAAACCGAA CTACGTACTG
GACCGCATCG AACATGTTGC GAAACGCTTT CGCGAGCCGG TGATCGCATG CTTGGGGCTC
GCGTTCAAGG CCGACATCGA CGACCTGCGC GAAAGCCCCG CCGTGGGCAT CGTCCGGGAA
CTGGCGAATC GCGAAGTCGG GCAGGTCATC GCCGTCGAAC CGAACATCCG TCAGCTTCCG
GCGTCGCTGG AAGGGCGCGT GATGCTCGGC GAAATCGCCG ATGCGCTCGC GCGTGCGGAT
ATCGTGGTCA TTCTCGTCGA TCACCGGCAA TTCAAGCGGA TCGATCCGAT GAAGCTGCAC
ACGAAGATCG TGATCGATAC GCGTGGGTTG CTGGCGCGCG AACGGCAGGT GGCCTGA
 
Protein sequence
MSFDVISVIG LGYIGLPTAA AFAARRKSVV GVDVNRATVD TINRGEVHIV EPELDMLVRA 
AVTQGHLRAT DTVEPADAFL IAVPTPFAAG HKPDLTYVEA ASRAIGPVLK KGDLIVLEST
SPVGTTEKIA AWLAAMRPDL TFPQQAGEQS DIRIAHCPER VLPGHVIREL VENDRVIGGM
TRRCSELAAE LYRVFVRGEC VLTDARTAEM CKLTENSFRD VNIAFANELS VICESLDINV
WELIRLSNRH PRVDILQPGP GVGGHCIAVD PWFIVDSAPE HARLIRTART VNDDKPNYVL
DRIEHVAKRF REPVIACLGL AFKADIDDLR ESPAVGIVRE LANREVGQVI AVEPNIRQLP
ASLEGRVMLG EIADALARAD IVVILVDHRQ FKRIDPMKLH TKIVIDTRGL LARERQVA