Gene BamMC406_3693 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3693 
Symbol 
ID6181115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp654536 
End bp654985 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content64% 
IMG OID641683463 
Productprotein tyrosine phosphatase 
Protein accessionYP_001810376 
Protein GI172062725 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.566781 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.81094 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAGC ATCTGCTCGT CGTTTGCCAC GGCAACGTGT GTCGCAGCCC GATGGCGCAG 
GGCTTGTTCC AGCGCTTGCT TCCTGACGTG TCGGTCTCGT CGGCCGGCTT GTCGGCCCGC
AACGGTATGG TGATCGACGC CGTTGCCGCG GCGCTGCTGA AGGCACGGGG AATCGACATG
TCCGGACATC GCGCGAGGCG CCTCGACGAG CGCATGTGCA GCGCGGCGGA CCTGATTCTC
GTGATGGAGC TCGAGCAACG CAAGGCGATC GAGCGTTTCC ATCCGGCCGC GCGAGGGCGC
ATCTATCGCG TCGCCGAAGC CTTTCCATCC GATGTGGCGG ATCCGTATCG TCGTTCGCAG
CGCAGTTACG ACTATGCGTT GACGCTGATC GAGCACGGCG TCAACGACTG GGTCGAGCGC
ATCGGCAACC TGATCGAGCG TGCCCGTTGA
 
Protein sequence
MIKHLLVVCH GNVCRSPMAQ GLFQRLLPDV SVSSAGLSAR NGMVIDAVAA ALLKARGIDM 
SGHRARRLDE RMCSAADLIL VMELEQRKAI ERFHPAARGR IYRVAEAFPS DVADPYRRSQ
RSYDYALTLI EHGVNDWVER IGNLIERAR