Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3683 |
Symbol | |
ID | 6179425 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 640053 |
End bp | 642362 |
Gene Length | 2310 bp |
Protein Length | 769 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641683453 |
Product | CheA signal transduction histidine kinase |
Protein accession | YP_001810366 |
Protein GI | 172062715 |
COG category | [K] Transcription [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.461303 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGGCG ATGACGATCT GAGCCACCTG TCGCTGCTCG AGCTGTATCG CGAGGAGACG CGCACGCAGA CCCAGGCGCT GTCCGAACGC CTGCTCGCGC TCGAATCGGG CGAGCCCGAT TCCGTCGCGC TGGAGGCGTG CATGCGTGCC GCGCATTCGC TGAAGGGCGC CGCGCGCATC GTCGGCGTGC CGCTCGGCGT CGAGATCGCG GGGCGGATGG AAGAATGCTT CGTCGCCGCG CAGGCCGGCA CCATCGCACT GACGGCCACG CATGTCGACG TGCTGCTCGC CGGCGTCGAC CTGCTGGTGC GCGTCGCCGA TCCGCAGGCG CCGCCCGTGT CGTCGACGGA GATCGACGCG TTCGCGCTGG CGCTCACGGG CGCCGACGGC ACGCACGCGA TGCCGTCACC GGCCTTCGCG CCGCCGCCGG CGCCGCCGTC CAGCGTGCCG TTTCGCGATC ACGACGGCGC CGCGAACGAG CCCGTGGGGG CCGGCGCCGC GGTGCCGCCG CTTGCCTTGT CGGCGGCAGT GCCCGATCCG GTCCCGGCCG GCCGTGCGGC CGGCGCGGGC GCGATGCGCC GCGTGCGGGC CGATACGCTG AACCGGCTCT TGAGCCTGTC CGGCGAGTCG CTCGTCGAAT CGCGCTGGCT CAAGCCGTTC GCGGAATCGA TGCTGCGCGT GAAGCGCGCA CAGCGCGACG CGGCCCGCTC GCTCGATCTG TTGTACGAAC GGTTCGCCGA CGAGCTCGAT GCGGGCGTGC TCGCGTCGGT CAACGAAGTG CGGCACATGC TCAACGACGT GCAGCGTTCG CTCGCCGAGC GCATGGAAGA ATTCGACCGC TTCGAGCGCC GCAGCACGCA CATCGCCGAG CAGCTGTACG ACGAGGCCCT CCAGTGCCGG ATGCGCCCGT TCGGCGACGC GACGCGCGCG TATCCGCGCA TCGTCCGCGA TCTCGCGCGC TCGCTCGGCA AGCAGGTGCG CTTCTCGATC GTCGGCGAAG GCACGCAGGT CGACCGCGAC ATCCTCGACC TGCTCGACGC GCCGCTCGGC CACCTGCTGC GCAACGCGAT CGATCACGGC GTCGACTCGC CCGACGCGCG CCGCGCGCGC GGCAAGCCGG CCGAGGCGAG CGTGACGCTC GAAGCGCGCC ACAGCGCCGG CTCGCTGCTC GTCAGCGTGA TCGACGACGG GCCGGGCGTC GACATGGATG CGCTGCGCGC GGCGGTCGTG CGCCAGCGCC TGACCGACGA CGAGACGGCC GCCCGGCTGT CCGATCCGGA ACTGCTCGAA TTCCTGCTGC TGCCGGGCTT CTCGATGCGC GATGCGGTGA CCGACGTGTC GGGCCGCGGC GTCGGCCTCG ATGCGGTGCA GGAGATGGTG CGCGGCGTGC GCGGCGCGGT GCGCATCTTC AACGAGCCCG GCGCGGGCAT GCGCTTCGTG CTGCAGCTGC CGCTCACGCT GTCGGTGATC CGAAGCCTGC TGGTCGAGGT CGGCGGCGAG CCGTACGCGT TCCCGCTCGC GCACGTGCGC CGCACGCTCG AACTGTCGCA CGACGACATC GACGTGCTCG AAGGACAGCC GCATTTTCCG TTCGACGGCC GGCGTGCGGG CCTCGTCGGC GCGCACCAGC TGCTCGATGC GGGCGAGCCC GCCGTCACAC GCACGAGCAC GGCGGTCGTG GTCGTCGGCG GCGAGCCCGA GCTGTACGGC GTCGCCGTCG ACCGCTTCCT CGGCGAACGG ATGCTCGTCG TGCAGCCGCT CGACAGCCGC CTGCAGAAGA TCCAGAACAT CGCGGCCGGC GCGTTGCTCG AGAACGGCGA CCCGGTGCTG ATCGTCGACG TCGAGGACCT GATCCGCTCG GTCGACAAGC TCGTGCGCGG CGGCCAGCTC GCGAAACTCA CGCGCGATCC GCAGCACGCG CGGGCCGACC GGCGCCGCCG TGTGCTCGTC GTCGACGATT CGCTGACGGT GCGCGAGCTC GAACGCAAGC TGCTGGAAAA GCGCGGCTAC GACGTGACCG TCGCGGTCGA CGGGATGGAC GGCTGGAACG CGGTGCGCAG CGACGCGTTC GACCTGGTCG TCACCGACGT CGACATGCCG CGCATGGACG GGATCGAGCT CGTCACGCTG ATCAGGAGCG ATCCGGCGCT CAAGCGGGTG CCCGTGATGA TCGTGTCGTA CAAGGATCGC GACGAGGATC GCCGGCGCGG GCTCGATGCC GGCGCCGACT ACTATCTCGC GAAGAGCAGT TTCCACGACG AGGCGCTGCT CGATGCGGTG CACGACCTGA TCGGCGGGGC ACGCGGATGA
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Protein sequence | MSGDDDLSHL SLLELYREET RTQTQALSER LLALESGEPD SVALEACMRA AHSLKGAARI VGVPLGVEIA GRMEECFVAA QAGTIALTAT HVDVLLAGVD LLVRVADPQA PPVSSTEIDA FALALTGADG THAMPSPAFA PPPAPPSSVP FRDHDGAANE PVGAGAAVPP LALSAAVPDP VPAGRAAGAG AMRRVRADTL NRLLSLSGES LVESRWLKPF AESMLRVKRA QRDAARSLDL LYERFADELD AGVLASVNEV RHMLNDVQRS LAERMEEFDR FERRSTHIAE QLYDEALQCR MRPFGDATRA YPRIVRDLAR SLGKQVRFSI VGEGTQVDRD ILDLLDAPLG HLLRNAIDHG VDSPDARRAR GKPAEASVTL EARHSAGSLL VSVIDDGPGV DMDALRAAVV RQRLTDDETA ARLSDPELLE FLLLPGFSMR DAVTDVSGRG VGLDAVQEMV RGVRGAVRIF NEPGAGMRFV LQLPLTLSVI RSLLVEVGGE PYAFPLAHVR RTLELSHDDI DVLEGQPHFP FDGRRAGLVG AHQLLDAGEP AVTRTSTAVV VVGGEPELYG VAVDRFLGER MLVVQPLDSR LQKIQNIAAG ALLENGDPVL IVDVEDLIRS VDKLVRGGQL AKLTRDPQHA RADRRRRVLV VDDSLTVREL ERKLLEKRGY DVTVAVDGMD GWNAVRSDAF DLVVTDVDMP RMDGIELVTL IRSDPALKRV PVMIVSYKDR DEDRRRGLDA GADYYLAKSS FHDEALLDAV HDLIGGARG
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