Gene BamMC406_3670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3670 
Symbol 
ID6181399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp625220 
End bp626440 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content71% 
IMG OID641683440 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_001810353 
Protein GI172062702 
COG category[C] Energy production and conversion 
COG ID[COG1251] NAD(P)H-nitrite reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.687493 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGACTG ACCCGTTCGT GATCGTCGGC GCCGGCCATG CGGCGCGGCG CACGGCCGAG 
GCGCTGCGCG CGCGCAACGC CGATGCGCGC ATCGTGATGA TCGGCGCGGA GCGCGAGCTG
CCGTACGACC GGCCCGCGCT GTCGAAGGAC GCGCTGCTGA GCGACGGCGG CGAGCAGCGC
GCGTTCATCC GCGATGCCGC GTGGTACGAC GCGCAGCGCA TCGAGCTGCG GCTCGGCACG
CGTGTCGATG AGATCGAACG CGATGCACGG CGTGTGCGGC TCGACGACGG TGCGACGTTG
CCGTACGCAC GGCTCGTGCT CGCGACGGGT TCGCGGGTGC GTGCGTTCGG CGGTCCGGTC
GACGAAGGCG TCGTTCCTCA TTACGTGCGC ACCGTCGCCG ACGCGCGCGC GTTGCGGGCG
CAGCTTGCGC CCGGACGCCG CGTGGCGGTG CTCGGCGGCG GCTTCATCGG CCTGGAAGTG
GCGGCCGCGG CGCGCCAGCG CGGCTGCGAC GTGACGGTGA TCGACCCGGC GCCGCGCTTG
CTGCAGCGTG CGTTGCCGGA AGTCGTCGGC GCGTATGCGC GGCAACTGCA TGACGCGCAC
GGCGTGAACT TTCAGATGGC GACGCTGCCC CGTGCGATTC GCCGCGGAGC GGGTGGCGGT
GCGATCGTCG AGACCGATCG CGGCGACGTG CCGGCCGATA TCGTCGTGGT CGGGATCGGC
GTGGTACCCA ACGTCGAGCT TGCGCAGGCG GCCGGCCTCG AGGTCGACAA CGGGATCCGT
GTCGATGCGG GCTGCCGCAC GGCCGATCAG GCGATCTTTG CGGCGGGCGA GGTGACGATG
CACTTCAATC CATTGCTCGG GCGTCACGTG CGGATCGAGT CGTGGCAAGT CGCGGAAAAC
CAGCCGGCAA TCGCGGCCGC GAACCTGCTT GGCGCGGACG AAACCTATGC CGAGCTGCCG
TGGCTGTGGT CCGATCAGTA CGACTGCAAC CTGCAGATGC TCGGCTTGTT CGGCAGCGAA
CGCACGACGG TTGTGCGCGG CGATCCGGCG AGCGGGCCGT TCACGGTGTT CGGACTGGGC
GACGATGGCA GGATCGTCGC GGTGGCCGCG GCGAACCTCG GGCGCGACAT CGGCGCGTCG
CGCCGGCTGA TCGCGGCCGG GGCTGTGCCC GACCCGGTGA AGCTTGCCGA TCCGGCGGTG
AACCTGAAGA CGTTCCTCTG A
 
Protein sequence
MSTDPFVIVG AGHAARRTAE ALRARNADAR IVMIGAEREL PYDRPALSKD ALLSDGGEQR 
AFIRDAAWYD AQRIELRLGT RVDEIERDAR RVRLDDGATL PYARLVLATG SRVRAFGGPV
DEGVVPHYVR TVADARALRA QLAPGRRVAV LGGGFIGLEV AAAARQRGCD VTVIDPAPRL
LQRALPEVVG AYARQLHDAH GVNFQMATLP RAIRRGAGGG AIVETDRGDV PADIVVVGIG
VVPNVELAQA AGLEVDNGIR VDAGCRTADQ AIFAAGEVTM HFNPLLGRHV RIESWQVAEN
QPAIAAANLL GADETYAELP WLWSDQYDCN LQMLGLFGSE RTTVVRGDPA SGPFTVFGLG
DDGRIVAVAA ANLGRDIGAS RRLIAAGAVP DPVKLADPAV NLKTFL