| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3666 |
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| Symbol | |
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| ID | 6179143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 621942 |
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| End bp | 622901 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641683436 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001810349 |
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| Protein GI | 172062698 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.293166 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.370367 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCCAA CGTCGTTCGA GCCGCTCGCG CTGCGCGCGC ACCGGCTGTT CGAATCCCGC
GATCTCGACG AGACGCGCGA GCGGATCTCG CGCGTGATGC AGCCGCACGC GCTGCTGCCG
AGCAGCCGCT TGCAACGCGC GTCGCACATG GATTTCGTGC GGCTCGGCGG GCTCGGGATG
GGCACCATCG CATTCGGCGA TGCAATGCGC GTGCAGGTCG ATGCCGTCGA CGGCTATTAC
CTGCTGATGT TCTGCCTGTC CGGGCAGGCG GAAGTCCACG CGATGGGACG CCAGCTCGGC
GTCGACGGGC AGACCGGCGT GCTGTGCGCG CCCGGCGAGC GCTTCGACGC GGTGCTGTCC
GCCGACTGCG AGCAGTTCGT GCTGCGCATC GACGCGGCGA CCGTCGGCTC GCTCACCGGC
GACCCGCGCG CGACGCTCGA CCCCGTGCTG CACATCAGCG ACGCCGCGCT CTCCGCGTGG
CGCCAGCAGC TGATGCTCGT CGCCCGCTCG CCCGAGCTGC TCGAACGCGC GAACGCCAAT
CCGCGCGTGG CGTCGCAGCT CGAGCACCTG CTGATCGACC TGCTGATCGA AGGCCACCCG
CCGTCCGTGC TGCGCGCGTC GCACCGCGAC CCGGCGCCGG GCTTCGTGCG GCGCGCGCAG
GAGTTCGTGA ACGCGCGCTA TGCGGAGCCG CTGCAGCTCG CGGATATCGT CCAGGCCGCC
AACGTGCCGG AACGGACGCT GCGCGACGCC TTCCTGCAGT TCCGCGGGAT GAGCCCGATG
CAATACCTGC GCGCGACGCG GCTCGACCAT GCGCGCGAGT TGCTGCGCGG CGCGGCATCC
CACCGTCGGA TTGCCGATAT CGCGCTCGAT TGCGGGTTTA CGCACCTTGG GCGGTTCGCG
ATCGCGTATC GGGAAAAATT CGGCGAGTCG CCATCGGAAA CGCTCGACGG CCAGCGATAG
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| Protein sequence | MSPTSFEPLA LRAHRLFESR DLDETRERIS RVMQPHALLP SSRLQRASHM DFVRLGGLGM
GTIAFGDAMR VQVDAVDGYY LLMFCLSGQA EVHAMGRQLG VDGQTGVLCA PGERFDAVLS
ADCEQFVLRI DAATVGSLTG DPRATLDPVL HISDAALSAW RQQLMLVARS PELLERANAN
PRVASQLEHL LIDLLIEGHP PSVLRASHRD PAPGFVRRAQ EFVNARYAEP LQLADIVQAA
NVPERTLRDA FLQFRGMSPM QYLRATRLDH ARELLRGAAS HRRIADIALD CGFTHLGRFA
IAYREKFGES PSETLDGQR
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