| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3661 |
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| Symbol | |
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| ID | 6179655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 616424 |
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| End bp | 617326 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641683431 |
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| Product | catechol 1,2-dioxygenase |
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| Protein accession | YP_001810344 |
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| Protein GI | 172062693 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | [TIGR02439] catechol 1,2-dioxygenase, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.245457 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.382747 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAGC AAGCCATCGA CGCCCTGCTG AAGACTTTCG ACGACGCCGC GGAAAAGCCC
GGCAACCCGC GCGTGCGCGC GATCGTCAAC CGGATCGTGA AGGACATCTG CTACACGATC
GAGGATTTCG ACGTGCAGCC GAGCGAGTTC TGGACCGCGC TCAACTACCT GAACGAAGCC
GGCCGTGAAT TCGGGCTGAT CGCCGCGGGC CTCGGCCTCG AGCGCTTCCT CGACGTGCGG
ATGGACGAGG CCGAGGAGAA GGCCGGCTTC CAGGGCGGCA CGCCGCGCAC GATCGAGGGC
CCCCTGTATG TCGCGGGCGC ACCGGAATCG GTCGGCCATG CGCGCCTCGA CGACGGCACC
GATCCGGGCC AGACGCTGAT CATGCGCGGC CGGGTGCTCG GCCAGGACGG CGCGCCAATC
GCGAACGCGC TCGTCGAGGT GTGGCACGCG AACCATCTCG GCAACTACTC GTACTTCGAT
CAATCGCAGC CCGCGTTCAA TCTGCGCCGC TCGATCCGCA CCGATGCCGA CGGCCGCTAC
AGCTTCCGCA GCGTGCTGCC GGTCGGCTAC AGCGTCCCGC CGGGCAGCAA GACCGAGCAG
CTGCTCGACC TGCTCGGCCG CCACGGCCAT CGTCCGGCGC ACATCCACTT CTTCGTTTCC
GCGGACGGAT ATCGTAAGCT GACGACGCAG ATCAACATCG AAGGCGATCC GCACATCTGG
GACGACTTCG CGTTTGCGAC CCGCGAAGGG CTGATCCCGC AGATCAAGCA GGCCGAGGGC
GCGGAAGGCA AGCCGTATGG CGTCGACGGG CAGTTCGCGC TGATCGACTT CGATTTTTCG
CTGCTCAAGG ACAAGCAGGA CGTGCCGGCG AGCGAAGTCG AGCGGGCGCG TGCGCAAGCC
TGA
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| Protein sequence | MNKQAIDALL KTFDDAAEKP GNPRVRAIVN RIVKDICYTI EDFDVQPSEF WTALNYLNEA
GREFGLIAAG LGLERFLDVR MDEAEEKAGF QGGTPRTIEG PLYVAGAPES VGHARLDDGT
DPGQTLIMRG RVLGQDGAPI ANALVEVWHA NHLGNYSYFD QSQPAFNLRR SIRTDADGRY
SFRSVLPVGY SVPPGSKTEQ LLDLLGRHGH RPAHIHFFVS ADGYRKLTTQ INIEGDPHIW
DDFAFATREG LIPQIKQAEG AEGKPYGVDG QFALIDFDFS LLKDKQDVPA SEVERARAQA
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