| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3656 |
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| Symbol | |
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| ID | 6180207 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 610965 |
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| End bp | 612548 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641683426 |
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| Product | type VI secretion-associated protein |
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| Protein accession | YP_001810339 |
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| Protein GI | 172062688 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3515] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03362] type VI secretion-associated protein, VC_A0119 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.983598 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.3606 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCTTG CCAATTTTGT GAAGACACTC GTCGGTGGTC CCCGCATCGA TTCGCTCCGC
AAGGCACGGA CGGATACCTG GGCCGCATGG GTCGCGCCGA TACCGGGCGA GCACGCATGC
GGGCGCGACC CCGGCTACGA AGACGCGTTC TTCGAACTGA AGGATGAAGC CGGCAAGCTG
TCGGGAATCG ATGACGGCAT GATCGTCCGC GTGTGCGAAC ACCTGCTCAA GGAGACCGGC
AAGGATTTGC GCGTCGCCGG CTACTACGCG TTCGCACGCC TGCGGCAGGA CGGCCCGGCC
GGGTTTGCCG ACGGGCTCGA ACTGGCTGCT GCGCTCGTCG ACCGGTTTGG CGAAGCTCTT
TTGCCTGCCC GTCACGAAGC GAAGAAGGCC GCGCTCGAAA TGCTCGCGAC TGCGCGCGTG
ATCGAGACGC TGGATAGTCG TGGCGACTTT GCGCCGGCCG ATCTCGAACG CGCGTTGGCC
GCGCTCGATG TGCTCGTCAC GCATACGGCG GCGTGGCCCG AGGCGGCTCG CCCGAATTTG
CAGTCGCTCG TTTCCCGCTT CGAGAAAAAG GAAGGGCCGG CACGCAGTGT CGATGCCGGT
GTCGCGATAC CGCCCGTTAC GGCCGCGGGA AAGACTTCAG CCGGATCGAT CGCGTCTACG
CGCGATCTGC TCGATCAGGC GCGGGCGATG TCGGCGTGGC TCAGGGATCA GGAAAACGGC
TATTTGCCGT CGGTGCGGCT CGTGCGAAGC ATCCGCTGGG ACACCGTGCA CGACGTGCCG
CCGTCGGATG CCGCGTCGCA TACGCGTCTG GCGCCGCCAC GTGCCGAATT GCGTCAGCAG
ATGAAGCGCC TCGTTCTGCA GAAGCACTGG CACGAGTTGC TGGAGCGTGT CGAGGGTGCG
TTCATGGAAG GCGTGAATCA CCTGTGGTTC GACCTGCAGT ATTTCCAGCA CATTGGGCTC
GACCACGTCG GCACACCGTA CAGCGCATGG CGTGAATTGC TGCGCACCGA CTTTGCGCTG
TTTCTCGAAC GACTGCCGGG CATCGAACGG CTGGCATTCA GCGACGGCAC GCCGTTCGCC
GACGACACGA CGCTCGAATG GATCGCCCGG CATGCGGTCG TGCGCGATCT GGAAGCGGGC
GAGACGGTCG CGCCGCTGCC CGTTTCCGCG GATAGCGCGA GCGATGCGGC GGGCGACTGG
CCGGAGATCG AAACCCAGGC TCGCGAACTG GCTGCCCGTG ACGGCATCGA AACGGCCTTT
GCGTGGCTCG AAGCGCTGCC CGGCATGAAA ACCGATCGAC ATCGCTATTT GCAGCGGCTC
GTGATGGCCC GCCTGGCCGA CCATGCCGGC CGTCACGATG CGGCGCTCGC ACTCCTTGCA
GAACTCGACG GAACGTCCCG TTCGCTGACA TTGATGCGCT GGGAGCCGGC GCTGACGTTT
GAGGTCAAGC AGCAACTGGT CAAAGCACTG AAAGCGATGA GCAGCCGCAA GGACGCCGAC
AAGCCGGCGT TCGCACGCCG CATCGGCGAG CTGCAGGCGG AACTCACGGT ACTCGATCCC
GCCCGCGCGT TGACCCTTTC GTAA
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| Protein sequence | MTLANFVKTL VGGPRIDSLR KARTDTWAAW VAPIPGEHAC GRDPGYEDAF FELKDEAGKL
SGIDDGMIVR VCEHLLKETG KDLRVAGYYA FARLRQDGPA GFADGLELAA ALVDRFGEAL
LPARHEAKKA ALEMLATARV IETLDSRGDF APADLERALA ALDVLVTHTA AWPEAARPNL
QSLVSRFEKK EGPARSVDAG VAIPPVTAAG KTSAGSIAST RDLLDQARAM SAWLRDQENG
YLPSVRLVRS IRWDTVHDVP PSDAASHTRL APPRAELRQQ MKRLVLQKHW HELLERVEGA
FMEGVNHLWF DLQYFQHIGL DHVGTPYSAW RELLRTDFAL FLERLPGIER LAFSDGTPFA
DDTTLEWIAR HAVVRDLEAG ETVAPLPVSA DSASDAAGDW PEIETQAREL AARDGIETAF
AWLEALPGMK TDRHRYLQRL VMARLADHAG RHDAALALLA ELDGTSRSLT LMRWEPALTF
EVKQQLVKAL KAMSSRKDAD KPAFARRIGE LQAELTVLDP ARALTLS
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