| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3652 |
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| Symbol | |
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| ID | 6181084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 601178 |
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| End bp | 603805 |
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| Gene Length | 2628 bp |
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| Protein Length | 875 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641683422 |
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| Product | chitinase-like protein |
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| Protein accession | YP_001810335 |
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| Protein GI | 172062684 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3179] Predicted chitinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAACC CACCCGCACC GAAGAAGCCA CAATCCCCCA CGCCGGCACC GGCCAAGCTG
AAGCCGTTAC CGTTCGCCTT TCCATTCCTG CGAAAGGGAA GGGGAAAGAC CGACGCTTCC
GTGCAATTCA CAGGCGAGCA CGAAATCTAT CGCCTGCTTG CCGAACGTGA GCCGTCAGGG
GCGTATCTCG TGAGCCGTAA GGGAATGTGG CATGGCGGCA TTCACGTTAC GGAGGCGTGC
GCCGGACAAT CGCTCGATCT TGACGCGGGC TTGCGCTGCA TCGCCGACGG CACACTGATT
GCATTTCGCG CCAACAAGAC CTATCCGATC AGCGAAATCG GTGGGGCGGG AAGTGAATCA
CCGGTTCAGG CACCGTACAG TACCGGCTTC GCACTCGTGC AGCACACGAT GGAGTTCCCA
CAGGGCGCGA AGCTGACGTT TTACAGCCTG TACATGCACC TGATGTCATT GGAGGACTAC
GCCAATTTCC CGAAGCGGAG CAAGCCGGCG TACTGGCCGC GGCAGTGGCG GGTCACTCAG
CATGCGCAGA ACAAACCTTC GTCTGGTCGA AACGGTCAGG TTCCGGATTC GTCCCAGCAA
GGGTTACGGG TTCGTAAAAG CTACCCACGT GGCGAGATCG TTGGCATCCT GCCGCAGGGG
GCAAGCGTTA GCATCGGCAA GCGGGAGAAG AACTGGGGCC AAGTAACCGA TCTGCACGGA
GCGTCACTGG TTCCACCCGA AGCCGGTGGC TATACCGAGC CGGTCCGCGC CGTTGGTGGC
TGGGTTTTTA TGGGCCAAGA GAACGGCGGA CCAACCGTCG AGGAGGTCAT CGAGGATTCG
ATGTTCGACC GGGTGATCGT CACGATAGAA CAGACTGGTC AGTCGGGAGA TTCGCGAGGA
ATCAGAGGCG GGATCCCGCT CAAAGCTGGC GACCCGATCG GCCACCTTGG TCGCTACGAT
TCGCTGAACG AATGCACGTC CGGCACAAGG ATGGCGCACA TCGAGGTGTT CTGTGACGAC
GGTATCGAGT CGTTCCTCGA GCAAGGTCGA GCGTGGGTCA ATCAACACGG TCCGCACAAG
GAAGACTGGT CGGTATTGGA TCTGCCCTCC GAGCCGACGA TTCTTCGGGT TGCACCGGGT
ACGGTGCTAT ATCAACGCCA GGACAAGAAA TTTGTTCCGG GAGTTGACCC GCAGTCAAGA
AAGACTGACA CAGTTCAGGT GTATTCGCTT GCCGAACTGG CACGCAAATC AGAACGACGA
GTCGCCGAAC CGAAGCCAAA CCCCAATCCA GGCTACCCGG TAAACTGGTG GCACGTCGAG
GGTGTGAATG CTCAAGGTCA ACAAATCGAC GGCTGGGTTT GCGACTTCAA CCACCCGAGC
GGCCGGGTGA CGCGGGAATT TGCGCAGAAG TGGATCGACT TCGAGTGCCT GGCGGACGCC
CATGATCCGG CGCATACGAT CTTTGCGACA ACCCCGAAGT GGGTTGATTA TGCGAGCGGC
GCCAATGTTG CCGACGTCTC TTCACGTTCG AATCTTAGCC CATTGATGCT CAAGGTGTAT
GACGCTTTGT TCACGAAAGG CGATGGCAAG AAAGCGGCTG ACGAACTATG CACGCTATCG
CGAACGGAGC GCGACGGGTA TCCGTGGTTG ATGCTGGCGG CATCCCGGCT GATCGTCAAG
CACCAAAGTG AGTGGGCCAA TCCGTCGAAG TGGAAGCAGC TGATCGCCGA ACTGGAGAAG
CAGACGGGCC TCAAGCCGCA GCACGAGGAA GAGCAGAAGC GGATCGATAA GCTTGCATGG
TGGGATGACT TGAAGGCCCA TATCCCAGGT TTTCCTGCCC CCGATGTATT TCATGTCAAT
CCAATTGGCT TAATCGCGAA TTTTTCACTC GATCTGGGAA TTATCACACT TGAGATGCTT
GCGGCAGTTG ATCCAGGTGG CAGTCAAAAT TATCACAGGC AGATCCTTCC TGCACTCAAT
AAGTACGCGA AAGGATATCG GGTCACTACG CCAAAGAGGA TTGCTCATTT TCTCTCGCAA
ATCGCCGTCG AGAGTAGTTT TAAGAATATC GAAGAAGGAC TTTCATATTC TTCAAAGCGA
ATGAAGGAGA TTTTCGGATG CAATCCTGCT CCCAAAGGCA AGAAGGCGTA TAGCGCAGTA
TCAGGCGATA TTGTTTGCAA TTTCGGTCGG CTGCGGGAGA AATTGTGGAC TGAAACAAGC
AAGTACGAAA ATAATCCAAG AAATCTTGCC AGCTATGTTT ATGCTGATCG ATATAAAAAT
GGAAACGAGG AGTCCGGAGA CGGGTATAAA TATCGCGGCA GAGGTCTTAT ACAGACGACA
TTTAAAAGCA ATTACATGAT GCTTACGGAT GAGCATAATC GCCGCTTCCC GGATGATCAA
CGTGACTTCG TGGAAAATCC AGATCTCGTT CTTAGCGATT TGGAGTATGG GGTCGAATCT
GCTTTTGTTT ACTGGGCTGT CACTAAAAAT GTTAACGGAA TTGCGGATTC TGGGAATGTC
CTCGCGGTTT CGAAAGCGGT AAACGGCGGG AAGATCGGGT ATTCAGAGCG CTTAACAGCC
TACAACAACG TGGCGCCAAT TCTTGGGCTA CAAAAGGAGG TGGCGTAA
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| Protein sequence | MANPPAPKKP QSPTPAPAKL KPLPFAFPFL RKGRGKTDAS VQFTGEHEIY RLLAEREPSG
AYLVSRKGMW HGGIHVTEAC AGQSLDLDAG LRCIADGTLI AFRANKTYPI SEIGGAGSES
PVQAPYSTGF ALVQHTMEFP QGAKLTFYSL YMHLMSLEDY ANFPKRSKPA YWPRQWRVTQ
HAQNKPSSGR NGQVPDSSQQ GLRVRKSYPR GEIVGILPQG ASVSIGKREK NWGQVTDLHG
ASLVPPEAGG YTEPVRAVGG WVFMGQENGG PTVEEVIEDS MFDRVIVTIE QTGQSGDSRG
IRGGIPLKAG DPIGHLGRYD SLNECTSGTR MAHIEVFCDD GIESFLEQGR AWVNQHGPHK
EDWSVLDLPS EPTILRVAPG TVLYQRQDKK FVPGVDPQSR KTDTVQVYSL AELARKSERR
VAEPKPNPNP GYPVNWWHVE GVNAQGQQID GWVCDFNHPS GRVTREFAQK WIDFECLADA
HDPAHTIFAT TPKWVDYASG ANVADVSSRS NLSPLMLKVY DALFTKGDGK KAADELCTLS
RTERDGYPWL MLAASRLIVK HQSEWANPSK WKQLIAELEK QTGLKPQHEE EQKRIDKLAW
WDDLKAHIPG FPAPDVFHVN PIGLIANFSL DLGIITLEML AAVDPGGSQN YHRQILPALN
KYAKGYRVTT PKRIAHFLSQ IAVESSFKNI EEGLSYSSKR MKEIFGCNPA PKGKKAYSAV
SGDIVCNFGR LREKLWTETS KYENNPRNLA SYVYADRYKN GNEESGDGYK YRGRGLIQTT
FKSNYMMLTD EHNRRFPDDQ RDFVENPDLV LSDLEYGVES AFVYWAVTKN VNGIADSGNV
LAVSKAVNGG KIGYSERLTA YNNVAPILGL QKEVA
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