| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3644 |
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| Symbol | |
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| ID | 6181228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 588770 |
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| End bp | 591478 |
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| Gene Length | 2709 bp |
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| Protein Length | 902 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641683414 |
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| Product | type VI secretion ATPase |
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| Protein accession | YP_001810327 |
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| Protein GI | 172062676 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03345] type VI secretion ATPase, ClpV1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.9184 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCCGC CGCTCCGGGA CGCTTCTCAT CTCATTCGCC GCCTCAATCC TCACTGCACG
CGCGCACTCG AAGCCGCGGC GAATCTGTGC CAGACCCGGC TCGCGGACGA AATCGCGGTC
GAGCACTGGG TGCTGAAGCT GATCGAAGCC GACGACGGCG ACATTCCCGC GCTGCTGCGC
CACTACGACC TCGACATCGA CGCCGTGTGG GATGCGATGA TCGACGTGAT CGAGCGCATG
CCACGCACGT TGCGCGGCAT GCCGGCGCTG TCGCGGCAAC TCGCCACGGT GCTGGAGGAT
GCGTGGGCGC ACGCGACGGC CGACGATCCC GACGACTCGA TTCGTTCGGG GCACCTGCTG
CAGGCGATCG TCGACGCCCC TCATGTGCTG CGCACCCAGC GTGCGTGGCC GCTGCTGTCC
GTCTCCAGCG CGCAGATTCG TCGTGTGCTG CCCCGGCTCG GGCGGCGCTC GTGCGAAAAC
GCGGTTGACG AACCCGTATC GGCACGCAAA GCGGACTCGG CCCGCGATCC GCACGCAACG
GGAACACCGA CGTCGGCCAC CGCGGCACAC CCTGCCCCCA CGCGCGCGAT CGAGCACGAC
GCACTCGCGC GCTTCACCCT CGACATCACC GAAAAGGCGC GTCGCGGCGA GATCGACCCC
GTCTTCGGAC GCGACCGCGA AATCCGGCAG ATGATCGACG TGCTCGCGCG CCGCCGCAAG
AACAATCCGA TCCTGGTTGG CGAACCGGGC GTCGGCAAGA CCGCGCTTGT CGAAGGGCTC
GCCTTGCGCG TGATCGACGG CGGCGTGCCG GAAACGATCC GCGGCACGCG CATCCTGACG
CTCGATCTCG GCTTGCTGCA GGCCGGCGCC GGTGTAAAGG GCGAATTCGA ACAACGGCTG
AAGAACGTGA TCGACGAGGT GCGAGCTTCG ACGACACCGA TCCTGCTGTT CATCGACGAG
GCGCACACGT TGATCGGTGC CGGTAACACG GCAGGCGGCG CCGATGCCGC GAACCTGCTC
AAGCCGGCGC TCGCACGCGG GGAGTTGCGC ACGATCGCGG CCACCACGTG GGCCGAGTAC
AAGCAATACT TCGAGCGCGA CGCGGCGCTC GAACGGCGCT TCCAGGTCGT CAAGGTCGAC
GAGCCGGACG ACGAAGCAGC GTGCCTGATG CTGCGCGGGC TCGCGAGCCG CTATGCGGCC
CATCACGAGG TTCACATCCG CGACGAGGCG ATCGTCGCGG CCGTGCGCCT GTCGCGCCGC
TACATTCCGG CGCGCCAGTT GCCGGACAAG GCCGTGGATC TGATCGATAC GGCAGCCGCG
CGCGTGCGGA TGGCACTCGA CGTACTGCCG GCGGAACTTC AACAGGCGCA TGCCGCGCTG
GCGGCGCTCG AGCTGGAACG CGCGGCGCTC GATGCGGACG CCCGTGCGGG CATCGCCGGC
ATCGCGGAGC GACGTGCCGC GATCGATACG GAGCACGACG CGATGCGCGA CACCGCCGAC
ACGCTGCTCG GTCAGTACGC ACGGGAGCGC GAACTCGTCG ATGCAGTGCG CACGCTTCGT
GGTGCGGCCG ACCCCGCGCC TGACTCGGCC CACGTAATCA AGGCGATCGA CGCGCTGGCG
AACGCTCAGG GAAAGTCGCC GATGATCTCC CCCGACGTCG ACGCGCAATC GATCGCGCGT
GTCGTCGCCG AATGGACGGG CGTACCGGTC GGCAATCTCG TCGAGGACGA ACTGCGGAGC
CTGCTCGCGC TCGAGTCGAC GCTCGCGACG CGCGTGGTCG GACAGGACGA TGCGATCGGC
GCATTGGCTG AGAGCTTGCG CACCGCCAAG GCCGGCCTGA AAAGCGAGCA CGCGCCGCTC
GGCGTATTCC TGCTCGCCGG GCCGTCCGGC GTCGGCAAGA CCGAGACGGC GCTCGCGCTC
GCCGACGCGC TGTTCGGCGG TACCGCGGCG CTGACGACGA TCAATCTGTC GGAGTACCAG
GAAGCGCACA CGGTATCGCA GCTCAAGGGT TCGCCACCCG GCTATGTCGG TTACGGACGC
GGCGGCGTGC TGACCGAAGC CGTGCGTCAG CGTCCGTACA GCGTCGTGCT GCTGGACGAA
GTGGAGAAGG CGCATCGCGA CGTGCTCGAT ATTTTTTATC AGGTGTTCGA CCGCGGCACG
ATGCGCGACG GTGAAGGGCG CGAGATCGAT TTCCGCAACT GCGTGATCGT GATGACGTCC
AATCTCGGCA GTGCGCAGAT AGACGACGCG ACGGCCGAGA ACGCGTCGAT CACGCAGGTC
GCGTTGCGCG AAGCCATTCA TCCGCAGTTG GTCGCGCATT TTCAGCCGGC GCTGCTCGCA
CGCTTCCAGA CGCTCGTCTA TCGGCCGCTC GATGCCGCGT CGCTTGCATC GATCATGCGG
ATCAAACTGG ACAAGATTGC CGAACGCCTG CATCGGCAAC ACGCCGTCAC GCTCACTTGC
GACGACGATC TGATCGAATC GATCGCGCAG CACTGCGTGT CACGGGAATC CGGCGCACGC
GATGTCGATG CATTCCTGAA CCAGCGTGTA CTGCCCGTCG TGTCCCGTGA GCTGCTTGCC
CGGATGGCAA CGGGTGTCAC GCCGCGACAC ATCGTGCTGT CGACCGGCGT TGAAGGTGCG
TTGACGATCG ATTTCGTCGA CGCCCCGGCC ACGACCGATA ACCGCATCGA GCAACCGAAC
CACCGATGA
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| Protein sequence | MTPPLRDASH LIRRLNPHCT RALEAAANLC QTRLADEIAV EHWVLKLIEA DDGDIPALLR
HYDLDIDAVW DAMIDVIERM PRTLRGMPAL SRQLATVLED AWAHATADDP DDSIRSGHLL
QAIVDAPHVL RTQRAWPLLS VSSAQIRRVL PRLGRRSCEN AVDEPVSARK ADSARDPHAT
GTPTSATAAH PAPTRAIEHD ALARFTLDIT EKARRGEIDP VFGRDREIRQ MIDVLARRRK
NNPILVGEPG VGKTALVEGL ALRVIDGGVP ETIRGTRILT LDLGLLQAGA GVKGEFEQRL
KNVIDEVRAS TTPILLFIDE AHTLIGAGNT AGGADAANLL KPALARGELR TIAATTWAEY
KQYFERDAAL ERRFQVVKVD EPDDEAACLM LRGLASRYAA HHEVHIRDEA IVAAVRLSRR
YIPARQLPDK AVDLIDTAAA RVRMALDVLP AELQQAHAAL AALELERAAL DADARAGIAG
IAERRAAIDT EHDAMRDTAD TLLGQYARER ELVDAVRTLR GAADPAPDSA HVIKAIDALA
NAQGKSPMIS PDVDAQSIAR VVAEWTGVPV GNLVEDELRS LLALESTLAT RVVGQDDAIG
ALAESLRTAK AGLKSEHAPL GVFLLAGPSG VGKTETALAL ADALFGGTAA LTTINLSEYQ
EAHTVSQLKG SPPGYVGYGR GGVLTEAVRQ RPYSVVLLDE VEKAHRDVLD IFYQVFDRGT
MRDGEGREID FRNCVIVMTS NLGSAQIDDA TAENASITQV ALREAIHPQL VAHFQPALLA
RFQTLVYRPL DAASLASIMR IKLDKIAERL HRQHAVTLTC DDDLIESIAQ HCVSRESGAR
DVDAFLNQRV LPVVSRELLA RMATGVTPRH IVLSTGVEGA LTIDFVDAPA TTDNRIEQPN
HR
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