Gene BamMC406_3636 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3636 
Symbol 
ID6179780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp580947 
End bp582194 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content67% 
IMG OID641683406 
Producthypothetical protein 
Protein accessionYP_001810319 
Protein GI172062668 
COG category[S] Function unknown 
COG ID[COG1679] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCAGT TGAGCGAGCG CGACGACGCG ATGTCGCGCG GCGCATTCGG CGACGGCGTC 
GCGCGCGCGA TGCGGATCGT CACGCGCACG GCCGAGGTCA TGTCTGCGCC GAACCTGATC
GACATCACGT CCGCGCATAT CGACGGCTGC CTTTACCACG GCCGGACGAG CCTCGACTTC
GTCGAGTATT TCGTCGACAC CGGCGCGCGC GTCGCGGTGC CGACCACGTT GAACGTCGGG
TCGCTCGACC TGATCCACCC CGAGCTGTAT CACGGCGATC GCACGATCGA GCGCGACGCG
CGGCGGCTGA TGGATGCGCA TCTGCAGCTC GGCTGCGAAT CGAGCTTCAC GTGCGCGCCG
TATCAGCTGA AGAATCGTCC GCGCGTGGGC GAGCAGATCG CGTGGGCCGA ATCCAACGCG
ATCGTGTTCG CGAATTCGGT GCTCGGTGCG CGCACCAGCC GTTATGGCGA CTTTCTCGAT
CTGGCCGCCG CGATCACGGG GCGTGCGCCG TATGCGGGCC TGCACGTCGA ATCGAATCGC
GCGGCGCGGA TCGTATTCAA CGCGCCGGAC TTCGGCAACC GGCCGTCGCG CGACATCTAT
TTCGCGGCGC TCGGGTTGCT GATCGGCAGG ATCGCGGGCG CGATCGTCCC CGCGATCGTC
GGGCTGCCTG CGGACACCAC CGAGGACGAA CTCAAGGCGC TCGGCGCGGC CGCCGCATCG
AGCGGGGCCG TCGCGCTGTT CCATGCGGTG GGCATCACAC CCGAGGCGCC GACGCTCGAC
GCCGCGTTGC ACGGGCAGGC GGCGCAGCGA ACGGTCGATG TCGCGATGGC CGACCTCGAC
GAGATCCGCC GCACTTTGAA TCATGGCGCG GCCGGAGATG CGCTCGTCGC GGTCGCGCTC
GGCACGCCGC ATTTTTCGCT GGCCGAATTT CGCACGCTCG ACGCGCTGCT CGATCAGTTC
GACGGCAAGC CGAAGTGCGA TTTCTACGTG AACACGAGCC GCTTCATCCT GTGGGAGCTG
GGCGAGCTCG GGCTCGCCGG CAAATTCGAC GCGCGCGGCG TCCAGATCGT CGTCGACACC
TGCACGTACA TCACGCCGGT GATGAAACAG CTGTCGGGCC TGGTGATGAC CAACTCGGGG
AAGTGGGCGT CGTATGCGCC CGCGAACATC GGCGTCACGG TCGCGTACGG CAGCATGCGC
GAGTGCGTGC GCTCCGCGTT CGAGGGAAAG GTGCGATTCG ATGACTGA
 
Protein sequence
MLQLSERDDA MSRGAFGDGV ARAMRIVTRT AEVMSAPNLI DITSAHIDGC LYHGRTSLDF 
VEYFVDTGAR VAVPTTLNVG SLDLIHPELY HGDRTIERDA RRLMDAHLQL GCESSFTCAP
YQLKNRPRVG EQIAWAESNA IVFANSVLGA RTSRYGDFLD LAAAITGRAP YAGLHVESNR
AARIVFNAPD FGNRPSRDIY FAALGLLIGR IAGAIVPAIV GLPADTTEDE LKALGAAAAS
SGAVALFHAV GITPEAPTLD AALHGQAAQR TVDVAMADLD EIRRTLNHGA AGDALVAVAL
GTPHFSLAEF RTLDALLDQF DGKPKCDFYV NTSRFILWEL GELGLAGKFD ARGVQIVVDT
CTYITPVMKQ LSGLVMTNSG KWASYAPANI GVTVAYGSMR ECVRSAFEGK VRFDD