| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3627 |
|---|
| Symbol | |
|---|
| ID | 6181001 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | + |
|---|
| Start bp | 570988 |
|---|
| End bp | 572805 |
|---|
| Gene Length | 1818 bp |
|---|
| Protein Length | 605 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641683397 |
|---|
| Product | glucosamine--fructose-6-phosphate aminotransferase, isomerizing |
|---|
| Protein accession | YP_001810310 |
|---|
| Protein GI | 172062659 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains |
|---|
| TIGRFAM ID | [TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGTGGCA TCGTCGGCGC GGTCGCGCAA CGGAACATCG TTCCGATTCT GATCGAAGGT
TTGCGCCGCC TCGAATATCG GGGCTACGAC TCATGCGGCG TGGCGACCGT CGTCGATGGC
CACGCGCGCC GCGAGCGCAG CGTGTCGCGC GTCGCGGATC TCGACGCGCA CGTGCGCAGC
GCCGGGCTGT CCGGCACCAC CGGCATCGCG CACACCCGCT GGGCGACGCA CGGCGCGCCC
GCCACCTGCA ACGCGCATCC GATCTTCTCG CGCGACGAAA TCGCGCTCGT GCACAACGGC
ATCATCGAGA ATCACGAAAC GTTGCGCAGG CAACTGTCTG ACGAGCACTA CGAATTCGAC
GGACAGACCG ACACCGAGGT CGTCGCCCAC CTGATCCACA GCAAGTATCG CGGCGACCTG
CTCGCCGCCG TGCGCGATGC GACGTCGCAG CTGCACGGCG CGTACGCGAT CGCGGTCTTC
AGCAAGCACG AGCCGCAGCG GCTGATCGGC GCGCGTGTCG GCTCGCCGCT CGTCGTCGGC
CTGAAGGACG ACGAATGTTT TCTCGCGTCC GACGCGCTCG CGCTCGCCGG CATCACCGAT
CGCTTCATCT TTCTCGAGGA AGGCGACATC GTCGAGCTGA CGCCGGGCGG CGTGCGAATT
CTCGAGCGCG GCGGCACGCC GGTCGATCGC CCGATCCAGA CCGTCTCGTC GACGCAGGGC
GTGGTCGAGC TCGGGCCGTA CCGGCATTTC ATGCAGAAGG AAATCTTCGA GCAACCGCAG
GCCGTGGCCG CGACCATTCC CGATGCGGGG CTGTTCGATC CGGCGGCATT CGGCCCGGAT
GCCGCGCGGG CGTTCGAGCA GATCGACAAC GTGCTGATTC TCGCGTGCGG CACGAGCTAC
TATTCCGGCC TGACTGGCCG CCGCTGGCTC GAGACGATCG CGCGCCTGCC CGCGCAAGTC
GAAATCGCGA GCGAATACCG TTACAGCGAC GCGCTCGCGC TGCCGAATAC GCTGGTGGTC
AGCGTGTCGC AATCGGGCGA GACCGCCGAC ACGCTTGCCG CGCTCAAGTA CACGCAGGCG
CTCGGCCATG TCGACACGCT CGCGATCTGC AACGTGCCGA CCAGCGCGAT GGTGCGTCAG
ACCAGCCTGC GGTTCCTGAC GCGCGCCGGC CCGGAAATCG GCGTCGCGTC GACCAAGGCG
TTCACGACGC AGCTCGTCGC GCTCTTCATT CTCTCGGTGA CGCTCGGCCG GCTGCGCGGC
TATGTCGACG ATGCGCAGCT CGCCCGCTAT GCGACGCAAC TGCGACGATT GCCGGACGCG
CTCGAGGACG TGCTCGGGCT GGAGCCGCAG ATCGAGCGCT GGGCGGTGGA GTTCTCGCGG
CACGAGAATG CGCTGTTTCT GGGGCGCGGG CTGCATTACC CGATCGCGCT CGAAGGGGCG
CTGAAGCTCA AGGAGATTTC ATATATCCAC GCGGAAGCGT ATCCGGCCGG CGAGCTGAAG
CACGGGCCGC TCGCGCTCGT GACGCACGCG ATGCCGGTCG CGACGATCGC GCCGAACGAC
GCGCTGCTCG AGAAGCTCAA GTCGAACATG CAGGAGGTGC GGGCGCGCGG CGGGCAGCTT
TACGTGTTCG CCGATGCCGA TACGCGGATC GACAACGGCG AAGGCGTGTC GGTGCTGAGG
ATGCCGGATT ACTACGGGCT GCTGTCGCCG ATCCTGCACG TCGTGCCGCT GCAGTTGCTC
GCCTATCACG CGGCGTGCCT GCGCGGCGCG GATATCGACA AGCCGAGGAA TCTCGCGAAA
TCGGTGACGG TGGAGTGA
|
|---|
| Protein sequence | MCGIVGAVAQ RNIVPILIEG LRRLEYRGYD SCGVATVVDG HARRERSVSR VADLDAHVRS
AGLSGTTGIA HTRWATHGAP ATCNAHPIFS RDEIALVHNG IIENHETLRR QLSDEHYEFD
GQTDTEVVAH LIHSKYRGDL LAAVRDATSQ LHGAYAIAVF SKHEPQRLIG ARVGSPLVVG
LKDDECFLAS DALALAGITD RFIFLEEGDI VELTPGGVRI LERGGTPVDR PIQTVSSTQG
VVELGPYRHF MQKEIFEQPQ AVAATIPDAG LFDPAAFGPD AARAFEQIDN VLILACGTSY
YSGLTGRRWL ETIARLPAQV EIASEYRYSD ALALPNTLVV SVSQSGETAD TLAALKYTQA
LGHVDTLAIC NVPTSAMVRQ TSLRFLTRAG PEIGVASTKA FTTQLVALFI LSVTLGRLRG
YVDDAQLARY ATQLRRLPDA LEDVLGLEPQ IERWAVEFSR HENALFLGRG LHYPIALEGA
LKLKEISYIH AEAYPAGELK HGPLALVTHA MPVATIAPND ALLEKLKSNM QEVRARGGQL
YVFADADTRI DNGEGVSVLR MPDYYGLLSP ILHVVPLQLL AYHAACLRGA DIDKPRNLAK
SVTVE
|
|---|
| |