| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3613 |
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| Symbol | |
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| ID | 6181530 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 552163 |
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| End bp | 553500 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641683383 |
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| Product | polyhydroxyalkanoate depolymerase, intracellular |
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| Protein accession | YP_001810296 |
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| Protein GI | 172062645 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4553] Poly-beta-hydroxyalkanoate depolymerase |
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| TIGRFAM ID | [TIGR01849] polyhydroxyalkanoate depolymerase, intracellular |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.811214 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTGC TTGCCTATCC GTTCTATCAA TGGTCTGCCG AATGCCTGCG CCCGGCGCGT
GCATGGGCGG CCACTGCACG CGCGACGATC GCGCTGTGGC CGCCGTCCAC CACCACGCCG
ACGGGCCGCA CGCTCGACGC ACTGTGCGAA CTGCTCGAAT GCTGCGCGTT CTCGCATCGG
CGTCCACCGT TCGGCATCCG GTCGATCGTC GTCGACGGGG AAACGGTACC GATCGTCGAG
GAGGCTGCCG CGGCCACCCC GTTCGGCACG CTGCTGCATT TCCGCAAGGC GCGGCCGGTC
GCGCCCCAGC CGCGCGTGCT GATCGTCGCG CCGATGTCCG GGCATTTCGC GACGCTGTTG
CGCGGCACGG TGCATACGAT GCTGGCCGAC CACGACGTGT ACATCACCGA CTGGCACAAC
CCCCGCGACA TCCCGCTGAC GGCCGGACGG TTCGGCTTCG ACGAATACGT CGCGCACGTG
ATCGACTTCA TTCGCCAGAT CGGCCCCGAC GCACATGTGC TCGCGATCTG CCAGCCGACC
GTCGCCGCGC TCGCGGCGGT CGCGCTGATG GCGGCCGGCG GCGATCCGGC GCAGCCCGCG
AGCCTGACAT TGATGGCGGG CCCGATCGAC TGCCGCGTGA ATCCGACGAA GGTCAACGCG
CTCGCCACGA GCCAGTCGAT CGAATGGTTC GCGCGGAACC TGATCAGCGT CGTGCCGGCC
GGCTTCGTCG GCGCGCAGCG GTGCGTGTAT CCGGGCTTCA TGCAGGTCGG CGCCTTCATG
TCGATGAATC CCGACCGGCA CGCGGCGTCG TTTGCCGATC TGTATTACGA GCGCGCGAAA
GGCGACCCCG CGAAAGCCGA CACGCTGCGG CACTTCTACG ACGAATACTT CGCAACGGCC
GATCTCACCG CGGAGTTCTA TCTGGAAACG GTCGAGAAGG TGTTCCAGCA ATACGCGCTC
GCGCGCGGCG AGCTGACGGT CGGCGACAGG CTCGTCGAAC CGGCGGCGAT TCATCGCACC
GCGCTGCTGA CGATCGAAGG CGAGAAGGAC GATATCTGCG CAGTCGGCCA GACGATGGCC
GCGCAGGAGC TGTGTTCGGG GTTGCCGCCA TATCTCAGGA CGCACCACGT GCAGACGGGC
GCGGGCCACT ACGGGGTGTT CAACGGCACC CGCTGGGAAA CGCAGATCTA TCCGATCGTG
CGCGCGACGA TCCACGACAA CGAGCCGTAC GATCGCACGG CGGATTCGGA AGGCAACGCG
AACGGCACGC ACTACGTCAC GCTGCGTGCA CTGCTCGATG CGCGCGCGAC GAGGCACGAT
GCGGCGGCCG AAACATGA
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| Protein sequence | MNLLAYPFYQ WSAECLRPAR AWAATARATI ALWPPSTTTP TGRTLDALCE LLECCAFSHR
RPPFGIRSIV VDGETVPIVE EAAAATPFGT LLHFRKARPV APQPRVLIVA PMSGHFATLL
RGTVHTMLAD HDVYITDWHN PRDIPLTAGR FGFDEYVAHV IDFIRQIGPD AHVLAICQPT
VAALAAVALM AAGGDPAQPA SLTLMAGPID CRVNPTKVNA LATSQSIEWF ARNLISVVPA
GFVGAQRCVY PGFMQVGAFM SMNPDRHAAS FADLYYERAK GDPAKADTLR HFYDEYFATA
DLTAEFYLET VEKVFQQYAL ARGELTVGDR LVEPAAIHRT ALLTIEGEKD DICAVGQTMA
AQELCSGLPP YLRTHHVQTG AGHYGVFNGT RWETQIYPIV RATIHDNEPY DRTADSEGNA
NGTHYVTLRA LLDARATRHD AAAET
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